| Alx1 | MA0854.1 | chr12:101905664-101905681 | ATTAATTAATTAATGCC | - | 6.9 |
| Alx4 | MA0853.1 | chr12:101905664-101905681 | ATTAATTAATTAATGCC | - | 6.6 |
| DMRT3 | MA0610.1 | chr12:101906051-101906062 | AATGTATCAAG | + | 6.02 |
| DUX4 | MA0468.1 | chr12:101908713-101908724 | TGATTAAATTA | - | 6.62 |
| EWSR1-FLI1 | MA0149.1 | chr12:101911280-101911298 | GGAAGGAAGGAAGGAAGG | + | 10.83 |
| EWSR1-FLI1 | MA0149.1 | chr12:101911284-101911302 | GGAAGGAAGGAAGGAAGG | + | 10.83 |
| EWSR1-FLI1 | MA0149.1 | chr12:101911268-101911286 | GAAAGAAAGAAAGGAAGG | + | 7.02 |
| EWSR1-FLI1 | MA0149.1 | chr12:101911272-101911290 | GAAAGAAAGGAAGGAAGG | + | 8.57 |
| EWSR1-FLI1 | MA0149.1 | chr12:101911288-101911306 | GGAAGGAAGGAAGGAGAG | + | 8.99 |
| EWSR1-FLI1 | MA0149.1 | chr12:101911276-101911294 | GAAAGGAAGGAAGGAAGG | + | 9.6 |
| Lhx3 | MA0135.1 | chr12:101907011-101907024 | AAATTAATTTATC | + | 6.17 |
| Lhx3 | MA0135.1 | chr12:101905666-101905679 | TAATTAATTAATG | + | 6.46 |
| Lhx3 | MA0135.1 | chr12:101905658-101905671 | TAATTAATTAATT | + | 6.78 |
| Lhx3 | MA0135.1 | chr12:101905662-101905675 | TAATTAATTAATT | + | 6.78 |
| Lhx3 | MA0135.1 | chr12:101905659-101905672 | AATTAATTAATTA | - | 6.78 |
| Lhx3 | MA0135.1 | chr12:101905663-101905676 | AATTAATTAATTA | - | 6.78 |
| Lhx3 | MA0135.1 | chr12:101905655-101905668 | ATTTAATTAATTA | - | 6 |
| MEF2C | MA0497.1 | chr12:101913084-101913099 | TTCTATTTTAAGATC | - | 6.22 |
| Nr5a2 | MA0505.1 | chr12:101906756-101906771 | AAGTTCAAGGCCACC | + | 7.55 |
| Nr5a2 | MA0505.1 | chr12:101905970-101905985 | GCTGGCCTTGAACTT | - | 8.42 |
| PHOX2A | MA0713.1 | chr12:101908054-101908065 | TAATTTAATTA | + | 6.62 |
| POU6F1 | MA0628.1 | chr12:101905660-101905670 | ATTAATTAAT | + | 6.02 |
| POU6F1 | MA0628.1 | chr12:101905664-101905674 | ATTAATTAAT | + | 6.02 |
| POU6F1 | MA0628.1 | chr12:101905668-101905678 | ATTAATTAAT | + | 6.02 |
| POU6F1 | MA0628.1 | chr12:101905660-101905670 | ATTAATTAAT | - | 6.02 |
| POU6F1 | MA0628.1 | chr12:101905664-101905674 | ATTAATTAAT | - | 6.02 |
| POU6F1 | MA0628.1 | chr12:101905668-101905678 | ATTAATTAAT | - | 6.02 |
| PROP1 | MA0715.1 | chr12:101908054-101908065 | TAATTTAATTA | - | 6.32 |
| PROP1 | MA0715.1 | chr12:101908054-101908065 | TAATTTAATTA | + | 6.62 |
| Phox2b | MA0681.1 | chr12:101908054-101908065 | TAATTTAATTA | + | 6.62 |
| ZNF263 | MA0528.1 | chr12:101911277-101911298 | AAAGGAAGGAAGGAAGGAAGG | + | 6.16 |
| ZNF263 | MA0528.1 | chr12:101911293-101911314 | GAAGGAAGGAGAGGAAAGAAA | + | 6.23 |
| ZNF263 | MA0528.1 | chr12:101910002-101910023 | GGAGGGGGGAGGGGAGGAAAA | + | 6.28 |
| ZNF263 | MA0528.1 | chr12:101911285-101911306 | GAAGGAAGGAAGGAAGGAGAG | + | 6.76 |
| ZNF263 | MA0528.1 | chr12:101909992-101910013 | TGGGGAGGGGGGAGGGGGGAG | + | 6.79 |
| ZNF263 | MA0528.1 | chr12:101911281-101911302 | GAAGGAAGGAAGGAAGGAAGG | + | 6.94 |
| ZNF263 | MA0528.1 | chr12:101909999-101910020 | GGGGGAGGGGGGAGGGGAGGA | + | 8.94 |
| ZNF740 | MA0753.2 | chr12:101909548-101909561 | GGGGGGGGGGGGG | - | 6.03 |
| ZNF740 | MA0753.2 | chr12:101909549-101909562 | GGGGGGGGGGGGG | - | 6.03 |
| ZNF740 | MA0753.2 | chr12:101909550-101909563 | GGGGGGGGGGGGG | - | 6.03 |
| ZNF740 | MA0753.2 | chr12:101909553-101909566 | GGGGGGGGGGCGG | - | 6.64 |
