EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM065-01298

Organism

Mus musculus

Tissue/cell

G1E

Coordinate

chr1:173274290-173274410

Target genes

Number: 16
Name	Ensembl ID

Sdhc	ENSMUSG00000058076
Tomm40l	ENSMUSG00000005674
Ndufs2	ENSMUSG00000013593
B4galt3	ENSMUSG00000052423
Ppox	ENSMUSG00000062729
Usp21	ENSMUSG00000053483
Ufc1	ENSMUSG00000062963
Rpl27	ENSMUSG00000079137
Dedd	ENSMUSG00000013973
Nit1	ENSMUSG00000013997
Pfdn2	ENSMUSG00000006412
Klhdc9	ENSMUSG00000045259
Pvrl4	ENSMUSG00000006411
Arhgap30	ENSMUSG00000048865
Usf1	ENSMUSG00000026641
Alyref2	ENSMUSG00000060244

TF binding sites/motifs

Number: 5

TF

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr1:173274378-173274398	ACACACACAACCCCCCCCCC	+	6.16
RREB1	MA0073.1	chr1:173274382-173274402	ACACAACCCCCCCCCCCCCA	+	6.4
ZNF740	MA0753.2	chr1:173274388-173274401	CCCCCCCCCCCCC	+	6.03
ZNF740	MA0753.2	chr1:173274300-173274313	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr1:173274301-173274314	GGGGGGGGGGGGG	-	6.03

Enhancer Sequence

CACATTCCCT GGGGGGGGGG GGGGACACGA CACACACAAC TCTACCCCCT CTGTGGCAAT 60
CCAGGAACAC TGCTCAACAG GGAGTTCTAC ACACACAACC CCCCCCCCCC CAAACCCTAC 120