EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM064-21225

Organism

Mus musculus

Tissue/cell

G1E-ER4

Coordinate

chr9:107962170-107963580

Target genes

Number: 30
Name	Ensembl ID

Tmem115	ENSMUSG00000010045
Nat6	ENSMUSG00000079334
Ifrd2	ENSMUSG00000010048
Gnai2	ENSMUSG00000032562
Rbm6	ENSMUSG00000032582
Traip	ENSMUSG00000032586
Uba7	ENSMUSG00000032596
Cdhr4	ENSMUSG00000079323
6230427J02Rik	ENSMUSG00000042106
RP24	ENSMUSG00000093456
Ip6k1	ENSMUSG00000032594
Gmppb	ENSMUSG00000070284
Gm20529	ENSMUSG00000092218
Amigo3	ENSMUSG00000032593
Mst1	ENSMUSG00000032591
Rnf123	ENSMUSG00000041528
Apeh	ENSMUSG00000032590
F630040L22Rik	ENSMUSG00000087645
Dag1	ENSMUSG00000039952
Tcta	ENSMUSG00000039461
Rhoa	ENSMUSG00000007815
Gpx1	ENSMUSG00000063856
Usp4	ENSMUSG00000032612
1700102P08Rik	ENSMUSG00000032611
Klhdc8b	ENSMUSG00000032609
Ccdc71	ENSMUSG00000049305
Usp19	ENSMUSG00000006676
Qrich1	ENSMUSG00000006673
Dalrd3	ENSMUSG00000019039
Arih2	ENSMUSG00000064145

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr9:107963094-107963112	GGAGGGAGGGAGGGAGGG	+	6.03
ZNF263	MA0528.1	chr9:107963091-107963112	CAGGGAGGGAGGGAGGGAGGG	+	6.02
ZNF263	MA0528.1	chr9:107963083-107963104	GGGGCAGGCAGGGAGGGAGGG	+	6.37
ZNF263	MA0528.1	chr9:107963095-107963116	GAGGGAGGGAGGGAGGGGGGA	+	7.86

Enhancer Sequence

CCTGCAGGAG GCACAGAGGA GGCATTTACT GCGAGGGTCA CAGGAACCCA GGCTGGCCTA 60
GGGTGCAGAA AGGCCTACCC AGGGCAGTGG CCTCACAACT GAGACCTGGA TTGCAGGAAG 120
TGTGAGCAGA AAGCATAAGG TGGAAGAATG GAGTTTTTGG CAGGCAAGAA CCCACCCAGC 180
TCTCACTATG ACCCACGCGA GAACCCATTA CGAAAGGTGA GGAGACTTTC CAGTACAGAA 240
AGACCATAGA AACAAGGGGG AACAGAACTG TGAGGGAGGC ATGGCACTGT CCAGGCCTAA 300
GACAGTGGAA AGAACTGGAT ATCCAAGACT AGGGAGACGT TGATGGGCTG CGTTGCCTGC 360
ACACCAAGAA TGACGTCCCC ATTTCTGAAG CTGAAGGTCA TGGAGCAGAG ACTCAGGACT 420
GGCGCAGGGC GGGAGTGTAG CCCGGCACAC TGAGCATGAG AGACCTGTGA ATGCTACCCA 480
AGAGTCTGTG TGCAGGAGGC AGGCAAATTT GGTCTGGAAT GCCAAGCAGA GGCTGGTGGG 540
AAAGAAGGGC AGCCATAATA AAGTCCCCGT TCCCGCAGTG AGACTCTCAG AGTCTCTACC 600
AGGATTAAGT GATGGGGCAC AGGACACAAG AAGGTGCCAC GGCCCAGCTC AGACTGTGCC 660
ATCCAGTCTG CACTTGACCC CAGGACCTGA GAAAATACAC AGAGGAATGG GGAATGGGCC 720
TGGACCACCC ATGGCAGTGG GTGCATCACC ACTGAGGCTG GGGACAGGGT AGATGATTTG 780
TGAGCACGAT CTCAGAGAGG TGGAGCAGCC AAGAGTGGGG GAGGGGAGGA AGCTAAGATA 840
GCAGAGAGAG AAGAGAGAGT GAGTGCTGTG GGCAGCTGTA GTCCAGGAAA GCACTCACAC 900
TTTAATAACA GGCGGGGCAG GCAGGGAGGG AGGGAGGGAG GGGGGAGCGC TGGAGACACA 960
GGAAAAGGAA GCTCAGGAAA GGAGGGCCTG GCTGCGGTGA AAAGCCTGCC TCTGATGTCA 1020
CACTCAGCAG CCAAAGACAG GAGTCACTCT TGGTCTGAGA GTCAGAATAA GACAAAGATG 1080
TCCATCTTTG CCATTAATTC TATTCAACAT AGCATTGGGG ATCACAGCCA GGAAAATTAG 1140
GCAGGAAAAA CAAGTGCAAG GCATCCAAAT GGGATGGAAG AGAAAAGCCA CCCTGTCCAC 1200
AAACACTGTC TTATGTTTAG AAATTCCAAA GGTCACACAC ACAGGGAGAA TTAGAAACAA 1260
ATCCTGTGAA GTTGTAGCAT ACAAAATGAG AACTACTAAA TATTGCTGGA AAAAATTAAG 1320
GACACAATCG GAGACATCTA TATTCATGGG CTGTTGGTAT AATACTGGTA CAATATTGGT 1380
GCTGACCAAA GGAATCTACC GCTTCCAACA 1410