EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM064-12839

Organism

Mus musculus

Tissue/cell

G1E-ER4

Coordinate

chr3:88174280-88174710

Target genes

Number: 27
Name	Ensembl ID

Hdgf	ENSMUSG00000004897
Rrnad1	ENSMUSG00000004896
Gpatch4	ENSMUSG00000028069
Apoa1bp	ENSMUSG00000028070
Mef2d	ENSMUSG00000001419
1700021C14Rik	ENSMUSG00000010538
Cct3	ENSMUSG00000001416
0610031J06Rik	ENSMUSG00000001418
Tmem79	ENSMUSG00000001420
Smg5	ENSMUSG00000001415
Pmf1	ENSMUSG00000028066
Slc25a44	ENSMUSG00000050144
Sema4a	ENSMUSG00000028064
Lmna	ENSMUSG00000028063
Mex3a	ENSMUSG00000074480
Rab25	ENSMUSG00000008601
Lamtor2	ENSMUSG00000028062
Ubqln4	ENSMUSG00000008604
Gm10704	ENSMUSG00000074479
Ssr2	ENSMUSG00000041355
Arhgef2	ENSMUSG00000028059
RP23	ENSMUSG00000093390
2810403A07Rik	ENSMUSG00000028060
Rit1	ENSMUSG00000028057
5830417I10Rik	ENSMUSG00000078684
Msto1	ENSMUSG00000068922
Dap3	ENSMUSG00000068921

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxq1

MA0040.1

chr3:88174562-88174573

TATAAACAATA

6.32

Enhancer Sequence

AACACCTGCG GATAAATTAT TCACAGCCGC AGCAGTTTGT AAGGGATATG GCCGCAGCCG 60
TGGCTGCGGT GGCAGAGATT GCTAAGGAAG TGACAATGGC TGCAGCAACG CCAAAAATCC 120
CTCTTAGATC TAAACAAAGT CATAGCAGAA GGAGCTTGAA CAGGCCAAGG TACAAGCGAG 180
GCATCCTAGT CACAACAGCC AAATGATATT CAGATACATT CTAGCACATA CTATAATAAC 240
AAATATCACT ACTACAATTA ACATTATTCT CATAACTAAC ATTATAAACA ATAAACACAA 300
AAGGAGGCCA CATACAAATA GGCGTAGCCT GAAAAGAAAC ATTCCTCCCT CCAGCAAATT 360
GAAATACAGA AGTTTCAAAC ACACTAGAAC CATTCCAATA AAAATTTGTA TTGCCCCAGG 420
CCCCTCCCGC 430