EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM064-09391

Organism

Mus musculus

Tissue/cell

G1E-ER4

Coordinate

chr17:57144240-57144780

Target genes

Number: 26
Name	Ensembl ID

Fem1a	ENSMUSG00000043683
Uhrf1	ENSMUSG00000001228
Safb2	ENSMUSG00000042625
Safb	ENSMUSG00000071054
2410015M20Rik	ENSMUSG00000049760
Rpl36	ENSMUSG00000057863
Lonp1	ENSMUSG00000041168
Ranbp3	ENSMUSG00000002372
Vmac	ENSMUSG00000054723
Ndufa11	ENSMUSG00000002379
Dus3l	ENSMUSG00000007603
Prr22	ENSMUSG00000090273
Rfx2	ENSMUSG00000024206
Mllt1	ENSMUSG00000024212
Clpp	ENSMUSG00000002660
Alkbh7	ENSMUSG00000002661
Pspn	ENSMUSG00000002664
Gtf2f1	ENSMUSG00000002658
Khsrp	ENSMUSG00000007670
Gm17168	ENSMUSG00000091390
Crb3	ENSMUSG00000044279
Slc25a23	ENSMUSG00000046329
Dennd1c	ENSMUSG00000002668
Tnfsf9	ENSMUSG00000035678
Gm11110	ENSMUSG00000079414
Vav1	ENSMUSG00000034116

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr17:57144354-57144365	GCCACGCCCCC	+	6.62
SP1	MA0079.4	chr17:57144351-57144366	CAAGCCACGCCCCCA	+	7.61
SP3	MA0746.2	chr17:57144353-57144366	AGCCACGCCCCCA	+	6.34
SP4	MA0685.1	chr17:57144351-57144368	CAAGCCACGCCCCCAGC	+	7.05
SP8	MA0747.1	chr17:57144354-57144366	GCCACGCCCCCA	+	6.11

Enhancer Sequence

GCCTGTGAGA GGAAGACACA GGAGCTCAGA CTGGATGAGC ACAGATCTCT GCTCTCTGCT 60
GGGCAGGGGC TCCAGCCGCT CTCACTGGGG ACTCTAAGCA GGGGCTCCAC CCAAGCCACG 120
CCCCCAGCCG CTCTCACTGG GGATTCTAGG CAGGGGCTAT ACCCATGAGC AGCAATTCCA 180
TCTAGCCAGG AAATCCTGAC AGCTGATGCC ACATGCATCA CTGTACTCAA GCAGTGACAG 240
GAAAGACACA GGTCACATAG CATCTAAAGC CTTTATAAAA AGTATCTGAG CCAGGCAGTG 300
GTAGCGCAGG CCTTTAATCC CAGCACTTGA GAGGCAGAGG CAGGTGGATT TCTGAGTTCG 360
AGGACAGCCT GGTCTACAAA GTGAGTTCCA GGACAGCCAG GGCTACACAG AGAAACCCTG 420
TCTCGAAAAA CAAAACAAAA AAATAGTATC TGAGCAGGCA GCTCTACAGG GACACATTGC 480
TGCTTCCCAG GTGGTGGTAA CTCACCTGGT CTCTGAACTA AGACCTCTGG GTCCCCACTT 540