EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM064-03949

Organism

Mus musculus

Tissue/cell

G1E-ER4

Coordinate

chr11:100579890-100581220

Target genes

Number: 30
Name	Ensembl ID

Eif1	ENSMUSG00000035530
Gm10039	ENSMUSG00000091478
Nt5c3l	ENSMUSG00000017176
Klhl10	ENSMUSG00000001558
Klhl11	ENSMUSG00000048732
Acly	ENSMUSG00000020917
Cnp	ENSMUSG00000006782
Nkiras2	ENSMUSG00000017837
Dnajc7	ENSMUSG00000014195
Gm11547	ENSMUSG00000085604
Zfp385c	ENSMUSG00000014198
Dhx58	ENSMUSG00000017830
Kat2a	ENSMUSG00000020918
Hspb9	ENSMUSG00000017832
Rab5c	ENSMUSG00000019173
Kcnh4	ENSMUSG00000035355
Ghdc	ENSMUSG00000017747
Stat5b	ENSMUSG00000020919
Stat5a	ENSMUSG00000004043
Stat3	ENSMUSG00000004040
Ptrf	ENSMUSG00000004044
Atp6v0a1	ENSMUSG00000019302
Naglu	ENSMUSG00000001751
Coasy	ENSMUSG00000001755
Mlx	ENSMUSG00000017801
Fam134c	ENSMUSG00000017802
Tubg1	ENSMUSG00000035198
Vps25	ENSMUSG00000078656
Wnk4	ENSMUSG00000035112
Aarsd1	ENSMUSG00000075528

TF binding sites/motifs

Number: 9

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ESR1	MA0112.3	chr11:100580210-100580227	CAGGTGACTGTGACCTT	-	6.55
HNF4G	MA0484.1	chr11:100580929-100580944	AAAGAACAAAGGTCA	+	6.08
RREB1	MA0073.1	chr11:100580102-100580122	GGGGTGGGGGTGGGGGTGGG	-	6.27
RREB1	MA0073.1	chr11:100580103-100580123	GGGTGGGGGTGGGGGTGGGG	-	6.27
RREB1	MA0073.1	chr11:100580108-100580128	GGGGTGGGGGTGGGGGTGGG	-	6.27
RREB1	MA0073.1	chr11:100580109-100580129	GGGTGGGGGTGGGGGTGGGG	-	6.27
ZEB1	MA0103.3	chr11:100579996-100580007	GGGCAGGTGGG	-	6.14
ZNF740	MA0753.2	chr11:100580651-100580664	CCCCCCCCCCCCC	+	6.03
ZNF740	MA0753.2	chr11:100580652-100580665	CCCCCCCCCCCCC	+	6.03

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_08141

chr11:100579619-100584693

Kidney

Enhancer Sequence

AAGCCGCTGC AAGAGAAAAG GTGGTGTCAT TAGGCAAGGA AGAACTGGAA ACCACCCTGA 60
CTTATTCTTG CTTGTTGCTT CTGGCATGTA GAAGCCTGTC CACACAGGGC AGGTGGGGCT 120
CATGCTCCTG TGTGTTGTCT GGGAAGTGCC TGCACTTGAG CCATTTCAGA GCCATCCTGC 180
AAAGCACAGC AGGGGCTAGA AAGGGGAGGC ACGGGGTGGG GGTGGGGGTG GGGGTGGGGG 240
GCTGATGCCA AGCCTGAAAA GGTAAGACCT CATCCCCCTA GCCTTCCTTC CACTGCCCTT 300
CACAGACCCA TTTTAGTTCA CAGGTGACTG TGACCTTCAG TTTCGGGAAG GCATTCTCTC 360
TGGGAAATAT ACACTGTCAC GCTGCCAGGC TGTGGCTGGG TGGCTGGCTT CCCAACCACC 420
CCTGCCACCT CCAGGCACTC CAGCTAGCCA CCATCCCCAC TGTGACCCAG AATCGTTCCT 480
GTATAGCCAG CCCGTGGTTT GAATACAGAT GCCACCTGAG ACAGGAATTC TGCTGCCTAG 540
AAATCTCCTA CCAAGAGAAC AGAGAAAGGA CTCAAGTCCA AGGGTGGCTC TGGCCTCTTG 600
AGGTTCACAC TGACTACAGA TGTGAGAGGC TAAGGCAAAC ATGTTTTGAA GGAGAATCCT 660
GGAGCTGGGA CAGACAGGTA GACAGGTAGG GTTCCCCATA CCCTGGACCC AGCCGAGGAT 720
TATGACAGTT CTGTGGGAAG CTGTTTTTCC TTGTTACCAC TCCCCCCCCC CCCCCAGCCC 780
ACTGAGGAGC CTGGACTGCC AACGCACTTC CCCCTCTCTA GCTCCTGACA GAGCTGAGGA 840
GGCAGTGAGA AGACTGCTGA CATGGCTTAT TCTGTTTCCA GCTGCCTGGA AATCTCCTAC 900
CAACCAAGAG AGCAGAGAAG AAGGATGACT CAAAACCAAG GGTGGCCCTG GCCTCTTGAG 960
GTTCACACTG ACTACGGACG TGAGAGACTG AGTCCAGAGC TTATTCACAT CCTAAATGCT 1020
GACCAATGGG GAATCAGAGA AAGAACAAAG GTCAGCAGCA GAGGAATGGA CATATATACT 1080
GCCCTGTAGG AAAAAAAAAA AAAAAAGACC TCACATCCAC ACAACTAATA AAGAGGCCAG 1140
ACCAGAGCAG GAAGCCAGTT TTCAATCCCT AGGTAATTCT TAGCACTCTT GCTTTTTGGG 1200
ACGAAGCATG AAGACTGACT GCTGGATTCA ACTCCAGGGC CCATTGACAA AAAGGTGTTC 1260
CCAGGCCAGA CAGGTCCGGT TTCTGCGTGT GCAGCCTTCC TCCAGACCCC TCTGGCCTGA 1320
CTTGCTTTGC 1330