EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM064-02338

Organism

Mus musculus

Tissue/cell

G1E-ER4

Coordinate

chr10:126644910-126645920

Target genes

Number: 28
Name	Ensembl ID

Xrcc6bp1	ENSMUSG00000025436
Avil	ENSMUSG00000025432
Tsfm	ENSMUSG00000040521
Mettl1	ENSMUSG00000006732
March9	ENSMUSG00000040502
Cdk4	ENSMUSG00000006728
Tspan31	ENSMUSG00000006736
Os9	ENSMUSG00000040462
B4galnt1	ENSMUSG00000006731
Slc26a10	ENSMUSG00000040441
Arhgef25	ENSMUSG00000019467
F420014N23Rik	ENSMUSG00000086597
Dtx3	ENSMUSG00000040415
Pip4k2c	ENSMUSG00000025417
Kif5a	ENSMUSG00000074657
Dctn2	ENSMUSG00000025410
Mbd6	ENSMUSG00000025409
Ddit3	ENSMUSG00000025408
Mars	ENSMUSG00000040354
Arhgap9	ENSMUSG00000040345
Gli1	ENSMUSG00000025407
R3hdm2	ENSMUSG00000025404
Ndufa4l2	ENSMUSG00000040280
Shmt2	ENSMUSG00000025403
Nxph4	ENSMUSG00000040258
Stat6	ENSMUSG00000002147
Tmem194	ENSMUSG00000040195
Nab2	ENSMUSG00000025402

TF binding sites/motifs

Number: 10

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NR2C2	MA0504.1	chr10:126645777-126645792	GGAGGTCAGAGGTCA	+	8.03
Nr2f6	MA0677.1	chr10:126645778-126645792	GAGGTCAGAGGTCA	+	7.42
RARA(var.2)	MA0730.1	chr10:126645768-126645785	AGCTCATCTGGAGGTCA	+	6
RREB1	MA0073.1	chr10:126645066-126645086	TGTGTGTGCGTGGTGTGTGG	-	6.19
RREB1	MA0073.1	chr10:126645114-126645134	TGTGTGTGTGTGGTGTGTGG	-	6.68
RREB1	MA0073.1	chr10:126645161-126645181	TGTGTGTGTGTGTGTGGGGG	-	6.95
RXRB	MA0855.1	chr10:126645778-126645792	GAGGTCAGAGGTCA	+	6.84
RXRG	MA0856.1	chr10:126645778-126645792	GAGGTCAGAGGTCA	+	6.91
Rarb(var.2)	MA0858.1	chr10:126645768-126645785	AGCTCATCTGGAGGTCA	+	6.23
Rxra	MA0512.2	chr10:126645778-126645792	GAGGTCAGAGGTCA	+	6.88

Enhancer Sequence

TTTGAGACAG GGTCTCCCTA TGTAGTCTAT GTAGGCCAGT AGCTCAATAT GCACACCAGG 60
CTGCCTGGAA CTCAGAGATC TATCCACCCG CCTCTGCCTC CCAAGTGCTG GGATTTTACA 120
GGTGTGCATC ACCACACCCA GGTATCTACT CATGTGTGTG TGTGCGTGGT GTGTGGCATG 180
TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGGTGT GTGGCGTGTG GCGTGTGTGG 240
TGTGTGGCAT GTGTGTGTGT GTGTGTGGGG GGTGGCGTGT GGTGTGTGTG TGCGTGCGTT 300
CACATGTGTG TGTGGAGGTC AGAAGACAAC TTGCAGAACC TGTTCTCCTC ATCCCACCAT 360
ATATCCTAGA GACTGAACTC AGGTTGTCAA ACATGGAAGC AACGGCTCTG ACCTGCTGAG 420
CCATCCCACC ATATATCCTA GAGACTGAAC TCAGGTTGTC AAACATGGAA GCAACGGCTC 480
TGACCTGCTG AGCCATCCCA CCATATATCC TAGAGACTAA ACTCAGGTTG TCAAACATGG 540
AAGCAACGGC TCTGACCTGC TGAGCCATCT TGCTGGCCCT TAGATGGTTT TTGTGTTAGT 600
TTTTGTTTTT TCACAAAACT GAATTTTTGC ATTTGATTTC TAAGTCTAAA ACCCTTTGAC 660
TCACTTAAAA ACAGACTATT TACTATTCTC CTTGTTTTTT GAGAAAGGGT CTCACTGTGT 720
AGCCCTGACT GGACCCACGA GCTCTGCTTG CCTCTTTGTC CTGAGTGCGG AGATTAAAGG 780
CTCCACCACT CCAGGCCTTG TTTTTCTCTC CCTTTGAACA CAAGTTTGTG TGAGTGTGAA 840
TAGGTGTGTG CACCACAAAG CTCATCTGGA GGTCAGAGGT CATTTCTTTC CACCACGTGG 900
GTGCTGGGTA TTGAACCCTT CTCCTTAGGC TTGGAGGCAA TCTCCTCACC CACTGAGCCA 960
CCTAACTGGC CCTCTGCTGT TCTAGATTTC CATGAGAAGG GTGAGGACCA 1010