EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM064-01157

Organism

Mus musculus

Tissue/cell

G1E-ER4

Coordinate

chr1:168079380-168080820

Target genes

Number: 3
Name	Ensembl ID

Rcsd1	ENSMUSG00000040723
Creg1	ENSMUSG00000040713
Tada1	ENSMUSG00000026563

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Mecom	MA0029.1	chr1:168079780-168079794	TCTTGTCTTGTCTT	-	6.34
Mecom	MA0029.1	chr1:168079785-168079799	TCTTGTCTTGTCTT	-	6.34
Nr5a2	MA0505.1	chr1:168080257-168080272	GGGGTCAAGGCCACC	+	6.05
TBP	MA0108.2	chr1:168080313-168080328	CCACCCCTTTTATAG	-	6.17
ZNF263	MA0528.1	chr1:168079400-168079421	CTCTCTCTCTCTCTCTCCTCT	-	6.22
ZNF263	MA0528.1	chr1:168079407-168079428	TCTCTCTCTCCTCTCTCCTTC	-	6.76

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_10099

chr1:168080110-168080876

Embryonic_stem_cells

Enhancer Sequence

CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCCTC TCTCCTTCCC TTCTCTGAGA 60
TCACCCATCC CACCTTTCCC TTCCACTGCC CAATCATCGG CTCTAGCCTT TGTTTGCCCA 120
GTTAGAAAGG GTCAGTGAGA TCACCTGAGT ATGTGATCTC ACCAGGGGCA GCCTTTCTTG 180
CGGAAGCAGA ATTAACATCA TCAAAATACA AACATCCCCA GGGCAACCCA CACTGGCCAG 240
GCCCTGTGAG CTCAGGATTC TGACCTGGCA CAGCGTCTCC ACGTTCTCGT CTCTGCCCAT 300
CTCACCCATT TTCTCTCCTA ACACTCTTGA AATCACCAGC ATTTCCCCGC TAGCAACTAC 360
TTCCCCTTCT CAGAGCCCTT CTTGGCTTTT GGGGACCTTG TCTTGTCTTG TCTTGTCTTG 420
TCTCTCTGAC CTTCACTGGA ACCTTTGAAT AACTTGGGTA CCTGGCATTT GCTTTGAGCC 480
ATGCCTAGCC CACATCTCTG TGAAAACATA CATGTATGCC ATTGGCTTCT AAACTTTCAT 540
CCCCAGACAT ATTACCAGCT GAAAGCCCCT CCTAGTTCTG TCCTCAAAAG GAAGAATTCA 600
GCCAAGAGAC ACGTACAGTT AAAACAGAAG TTGATTTACC CAAATAAAGC GTGAACCCCA 660
AAGAGAGACT GGAGTGGGCT GACCTGAAAG GAGAGGGAGT GGCTACCCAC TTGGTTCTGT 720
GTATAGAAAT ACAGCAGTTT TGTGAATATT TATGAGTTGG GCCACCTAGT CACTGGGACA 780
CTGTGGCCCC CTTTTCCTCT TAAACCACAG TGAACTAGAT TTTGCTTTTA GGATAATTCG 840
TCTTATGATC CTCTTGAAAA ACCCACAAAG TGGGGGAGGG GTCAAGGCCA CCATGCAAAT 900
GATATGGTAA TGAAGCTGGG GGTTTTGAAG GAGCCACCCC TTTTATAGGT GTGCGTGGAT 960
GATAATGAGA AAGTGCGCTG GTGCCTTCAT CTCTGATACA GCAGGGAGAG CTAACTGCAT 1020
CTCCCAGTGT GTTTAACCAC AAAGGGCAAT CTAACCACGG GAGACACAGC TACCATGACA 1080
TCGTATGGTT TCCTTGTTAT CTCTTGCCTA ACTCCTTACC TGTCTAGTTA CAGTGACATT 1140
CAGCTGTCCC ATATGGCCAT GGGTGTTCCG CTTCAGGCGT CCTGCACATA AACAGAACAC 1200
AAACTTTTTG TCTAAAGCAC TCTCCTCGTG TCTTAACTCT GTTGGGAAGG ATACCGGCAA 1260
ACATTCGTGC CTAAGCCCTA AATCTGGGAC TAGCTGCTCT CTAACTCTGC ATCTTGGTCC 1320
CACAATTTCA TGTGTCCCCC GTTTTCTTGC CCCTCCAACT CATTTTTGTC TCTGTGTGTT 1380
GCCACAACCC GATTTGACAA TAATCATGGT TTTTCACTCT TTTTCTTTTT CTAAGTTAAA 1440