EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM062-00063

Organism

Mus musculus

Tissue/cell

Forelimb_E11

Coordinate

chr1:193218140-193220110

Target genes

Number: 7
Name	Ensembl ID

Tatdn3	ENSMUSG00000026632
Batf3	ENSMUSG00000026630
Atf3	ENSMUSG00000026628
Nenf	ENSMUSG00000037499
Tmem206	ENSMUSG00000026627
Ppp2r5a	ENSMUSG00000026626
Ints7	ENSMUSG00000037461

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOS	MA0476.1	chr1:193219383-193219394	TGTGACTCATT	+	6.62
SOX10	MA0442.2	chr1:193218895-193218906	AAAACAAAGGA	+	6.32
Sox3	MA0514.1	chr1:193218895-193218905	AAAACAAAGG	-	6.02
ZEB1	MA0103.3	chr1:193220050-193220061	GCGCAGGTGGG	-	6.62

Enhancer Sequence

ACAAAACTCC TTGGCACCTT TCCAGTTCAG ATGCATGTGG ACAAAGTGTA AGCAAGCAGG 60
TTGGTTGATA TAAAATACTT GAAAGATCTT GGATGCCCAT GGATATCTGA ATCACTCCAC 120
AACCAGTGAG ATTGTATTTC AGAGCAGTTA AGAAAATTTC TCTTTCATAC GAAAGGGTTT 180
TCTGCTGTTG TTTTTGCTAA AACCCACAAC TGGGGGAAAA TACTACTGAC AGAAAAAACT 240
CTCAACACGG TGGTATCAAG GGCACTGCCA AAGCACCAAG TAAGACAACT CCATTAAAAA 300
AAAAAATCAC TTTTCAAGCA TTTTGACAAC TGGATTTAAA GCAGTTTTTC CTGAGGATTT 360
TATTTTCAAG TAAAAAGTTT TACTTCCTCA ATCGAATCTG CATCAGTTTA TCATGAATAA 420
TACCTTATGG GGAACACTAT ACACGCAAAT TTCAATTTCT TTCTACTACT GACCAAATTC 480
TGTATGTGAA AACATTGGCA GTTCCTGCTA CATCTTCAAC CAAACATCAG GTAACTTTGA 540
GTCTGATTAC TGATTCTGTG GATTTCTGTC CGTCTTAAAG GCAAAATCTA CTACAGAGGC 600
ATCTCAAGAC TAACCAGATG TTTAAAATTC AATTACTAGC AGAGGAACTA AGAAGTACAA 660
CACTAAGAAG AAGAAAACCA CGTTAGCAAA TTAGATACAT AAGAAAAATG CTAGTATCGA 720
GACTTCAAAC TAAAATTAAC AGGATAAACT AATGAAAAAC AAAGGATAAA ATAACTCTTA 780
ATTAAGTATA AAAGCTTAAA CCTCTGAGTA GCAATTCACT ATCCTAACAG GTAGGACAGA 840
GTTATTTTAG GCTATGGCTG CACTCCACTG ACAGTGCTGT ATCAATTTGA ACAATTCTAG 900
TATGGTAAAG AGCAATAAAG CAACAAATGA GACACCACAC ACCTAACATA AACTATTTTC 960
AAAAGTCTGT GTGATTCTAC CAGTGGTATA TCCTTAATTC AGAAGCACCC CGAGAGGCAG 1020
ATGTAGAGTT TAAATGGGGT TCCAAGCTGT TGCTGGTCAA CTGTTGATTT GATCTAGGGT 1080
TTTCTTTACA CTCCTTGCCA AACTAAGTCA GGATTCATAG ACTCAAAGAC AAATCACAAC 1140
CAGATTGGCC TTGAAAGGGA TGCTGGATCT TTGTCAAAAG AATTGAAAAA TCTGCTGATC 1200
ATTTATCTAT TTTGGCATGA GCCTTTCTTT TATTTCTTGG CCTTGTGACT CATTCTCTAG 1260
GTTTCTATCA GGTTGCAAAG AATTTCTTAA ATATCTAGGA ACATAAACAT CTTTTCCATT 1320
AATGACATCT AGCTCATAAA ATGCAAAGAC GTAAAATTAT TAAATTAAAA GCCAGTAATT 1380
CTCAAAGAAT AAGCAAGAAC GCCAGTAAAC AACTCATGAA AAGCCTCCAA ACCGGGTGAG 1440
AAAAGAGAGC CAAAAGGAGT GCCAAGCACT CCTGCGAGGC ATTAGGCACG GATACCAATC 1500
TGAATTACTT ACAAAACCTT ACAAAGTCCT TGGAAGCATA GCCGCGCTAA CCAAGTTCCC 1560
GTTCCACGGC AAAGAAATTA CTCTTCCTTC ATAACCTCTC CAAAGACAAT CGAGGTCTTC 1620
TGAGGTATAA CATTTACGTC TAACGAGACA GTAAGATCTG TCACCTGGTC CCGGTTTTAA 1680
GCTAGTTCTA TATAGCTACG TCTAAAGGCC AGCTAACTCG GCAGCAGTTT GTTTGGACCC 1740
TGGATGTGAC AACTGAGGGA CAAACAGAGA AAGAGAAGAA CTAGCTAAGC TTGGAGAAAA 1800
CCAGGGTTGA GGCTCAGCGA GGCAGGGAGT CGAAAGACTG GACGAGGGAA GGGAGCGCAG 1860
GTACCTCTGG GGACCCTGAA ATCGCCAAGG CAAGGGCAGG CGGGGCAAGC GCGCAGGTGG 1920
GAAGGGGAGT AGGGCTTGCC CCGGGAGCGC GGGCCAGGGG CGGCCGGGGG 1970