EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-12589

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr9:44413060-44414160

Target genes

Number: 8
Name	Ensembl ID

H2afx	ENSMUSG00000049932
Gm10080	ENSMUSG00000060467
Hyou1	ENSMUSG00000032115
Rps25	ENSMUSG00000009927
Bcl9l	ENSMUSG00000063382
Ddx6	ENSMUSG00000032097
Phldb1	ENSMUSG00000048537
Ift46	ENSMUSG00000002031

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EOMES	MA0800.1	chr9:44413836-44413849	TAGGTGTGAAAAC	+	6.67
TBR1	MA0802.1	chr9:44413837-44413847	AGGTGTGAAA	+	6.02
TBX20	MA0689.1	chr9:44413836-44413847	TAGGTGTGAAA	+	6.14
TBX2	MA0688.1	chr9:44413836-44413847	TAGGTGTGAAA	+	6.32
ZNF263	MA0528.1	chr9:44413235-44413256	GGAGGAGGAGCGGCGGGGAGC	+	6.32
Zfx	MA0146.2	chr9:44413141-44413155	CAGGCCTGGCCCGG	-	6.23

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_12126

chr9:44410759-44414271

Spleen

Enhancer Sequence

GCGTGGGGTG AGGCGGCGTG GTCGGGGTCG GCAGGATCCT GAGGGTATCA GGGAGCCCCC 60
TTCGGGCAGA AGCCCGAGGC CCAGGCCTGG CCCGGGAGGA CGGGCGGGTG GCCGCTGAGA 120
AGAGCGGGGG CGGCGGAGAG GAGTGGAACC GAGGAATGTG GCGTGTGCGG GGTATGGAGG 180
AGGAGCGGCG GGGAGCTCTG GACGAGCGGT GCGGTAGACG GGAGCGGGGA CGGAACACCG 240
GCCGGGACAC CCGAGTGAGG TTGGGAGTGC GAGGCAGGGC AGCCCTGCGG GGGGTGGCAG 300
GGCTGTGCTG GCCGGGGACT CGGCTGGGAG AGGAGCCGCG GCTGCTCGCT TGCAAGTAGG 360
CCTTGCAGGT TGGTGGGGAC AGAGGGTTTG GGGGAGACTC GGCGGCGTAA GAGGGGAGGA 420
GAGGCGGTCC AGTTTCGGGG TTCTCTTCCG GGCCTTCTGA GGGGGGGGAG TCCCTATTGT 480
TTCCCACTCG CAGAGCTGGT TCCGGCTCTT GTGGCGCAGA TAGGATTGCA GGGCAGAAAC 540
CCTTTTGCTT TTTGATCCGA GGGAGCTGGG TTTGAAGCGA GGGAAGTTGG GGGAGGGGGC 600
GAGGAATTAT TGCCTTACGG TTACCGGACT CCGATTCTTG GCTTAGGGTT TTCCCTTCGC 660
CATAGCCCCC CTTTACCTTC GTAAGAACCC CAATCACTCC TACTTCCTGT TGAGGCGTAT 720
AGAAATCGCC CTGTATTTGC AAACAAAAGC CCTTGTTGGA GCTTATGGGA CTGTTTTAGG 780
TGTGAAAACT GTCAATTGCT AACCACGGTC TGGGCCCTGC TGTAATTAAC TCTGCCAGGG 840
GCTCCTCCCA ACTAAGTCTT ATGTTCCTTC GTGGTTTTGT TTTAGGAATA TAACTTGCAA 900
ATCTAAATTG GGAAGGGGTA GGACGAAAAA TTTCCCACTG AGCCATAAAG CTGCAGTGCA 960
GGTATCCGTT TCTGGAGGGA GCAGTTATCG AAGTCTCTGG GTTTAAGGCG CTAGGAGGTT 1020
TTACTGTGCT TGATTGACAG TACTGATGGT GTCGGTTAGG ATTCAGAGGT TGCCCCCTTC 1080
ATCCTCTTAG TGCTGTACAA 1100