EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-12580

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr9:44214490-44214880

Target genes

Number: 16
Name	Ensembl ID

Cbl	ENSMUSG00000034342
Nlrx1	ENSMUSG00000032109
Abcg4	ENSMUSG00000032131
Hinfp	ENSMUSG00000032119
C2cd2l	ENSMUSG00000032120
Dpagt1	ENSMUSG00000032123
H2afx	ENSMUSG00000049932
Gm10080	ENSMUSG00000060467
Hyou1	ENSMUSG00000032115
Slc37a4	ENSMUSG00000032114
Trappc4	ENSMUSG00000032112
Rps25	ENSMUSG00000009927
Ccdc84	ENSMUSG00000043923
Foxr1	ENSMUSG00000074397
Bcl9l	ENSMUSG00000063382
Ddx6	ENSMUSG00000032097

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6(var.2)	MA0728.1	chr9:44214677-44214692	AGGGTCAAGAGGACA	+	6.3
Rarb	MA0857.1	chr9:44214676-44214692	TAGGGTCAAGAGGACA	+	6.21

Enhancer Sequence

TGATAATGGA CTGAACCTCT GAACCTGTAA GCCAGCCCCA ATTAAATGTT TTTTATAAGA 60
CTTGCCTTGG TCATGGTGTC TGTTCACAGC AGTAAAACCC TAATACAGAA GTTGAAGAGA 120
AACCCTATCC CCCCCAAATT TTTTTTTTTC AAAAATTCAA TTACCTTATG TTAATGATGA 180
AGAAACTAGG GTCAAGAGGA CAAGACCTGA CTGGGCAAAA ATCAAACTAC CTCAAACCTG 240
GCTATAGTTG ACATTTCTTC ATAAAAAGAG TTCAGCCACT TAAAGAGGTA CACAGTAATT 300
GTACCTCTTT AAGTACACAA AGAAACACTT TAGCCGGCCT AGAGACAGAT GCACTAGTCA 360
GGGGAGGAAA TGTTTAAAAG GGGTAGGGAA 390