EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-12452

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr9:21651710-21653660

Target genes

Number: 20
Name	Ensembl ID

Tmed1	ENSMUSG00000032180
Yipf2	ENSMUSG00000032182
Smarca4	ENSMUSG00000032187
Ldlr	ENSMUSG00000032193
Spc24	ENSMUSG00000074476
Kank2	ENSMUSG00000032194
Gm6484	ENSMUSG00000047822
Dock6	ENSMUSG00000032198
Rab3d	ENSMUSG00000019066
Tmem205	ENSMUSG00000040883
Ccdc159	ENSMUSG00000006241
BC018242	ENSMUSG00000040563
2310047B19Rik	ENSMUSG00000051238
Epor	ENSMUSG00000006235
Rgl3	ENSMUSG00000040146
Ccdc151	ENSMUSG00000039632
Prkcsh	ENSMUSG00000003402
Zfp653	ENSMUSG00000038895
Rpl15	ENSMUSG00000061167
Zfp872	ENSMUSG00000074472

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

TFAP2B(var.2)	MA0812.1	chr9:21653595-21653606	AGCCTGAGGCA	+	6.14
TFAP2C(var.2)	MA0814.1	chr9:21653595-21653606	AGCCTGAGGCA	+	6.32

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

mSE_07116	chr9:21650000-21653643	Heart
mSE_09349	chr9:21650064-21653653	Lung
mSE_10544	chr9:21650057-21653665	Embryonic_stem_cells

Enhancer Sequence

ACAGTCCTGG GAAGACAGGA AGGGGGTGTG GGAAACAAGT AAACTCAGGC TGGTATGGTG 60
GGGGGATGGG GGTAGTTTTA TTTGTAGGAG AGACCTCGGT GATGAAAGGA AAAATAAAAA 120
CAAGGGCTTA AAAATAAAAC CAAGAGGCCT GTGAGATGAT GGCTCAGCAG GTTTAAAACA 180
CTGCCCCATA CCTGAGCTCA GTCCCCACCC CAGACTCACA CAGGAGAGAG AGAGAACTGA 240
GTCCCCAAAG GGGTCCCCTT ACTTCAGGCG CCACACACAT AAACAAAGTA AAAACAACAG 300
TGAGCTGCTC TGTGCAGCAC AGTGGCAGAG GGCTGTCCCT GCAAGCGACA GGTTCCATTG 360
CCAGAAGCAC AAAACTAAAT ACACATATGA TACAGGATGC AGGCCTCTCT GCACCCCAGT 420
CCCTCCCTAC ACCAAACACA GACAGGGAAA TACCACTGTG CCCGAGGGAG TGACAGGTTC 480
CTCCCCCATC ATCTCCCTCC TAGACCCATC AAGGTCCAGA GGGACACATG CTCCCTCCAT 540
CTTTCCTGGG TTCTCCAAGC ACACCAATCC AGCACCCCTA GCTCTGGCAC AACACTCCTG 600
CCTCTCAGCC TCAGTTTACC CACTCACAGC TGCCCTGACC TCAGAGGGGT CTGGGGAGAC 660
CAGAGAAGTT CCCTACTGAC ATTCAGTAAG TGTTCTGTAC GTGTGTTCTC AGGGACTCTA 720
GGATGAGGGC GGGCGTGGAA ACCAATAGGA TCCTCAGCTC AGATAAAGAA CAGTACGTGC 780
GTCCCGGGCC TGAAGGTATT CAATAACTGT TACTTTGTTT TGCAGTGCTG AGGATTACCT 840
CTGGCCTCCT GCGGCTGAGG CACACCCTTA GCCCCTCACA GGATTCACCG CAGGGGCTCC 900
AGCACAAGCC ACTCCCCACC CCTGCCCTCC ATCTCTTAAC TTCAGCCTTT CAATACAGGA 960
ACCCTGCAGA AACATGCAGA CCGTGGCATG TGGGAGAGAA ATAGCCTTGG TTCACATCAG 1020
TTACTAAGGA GCTGCTCCGA CAGCTGAGGG TGGCAGAGGG CTCCTCTGTG GCACAGGATG 1080
GAATTAATGA GACACTCTAT CCCAGCCTTC CCCATGGTCT GACCTGCCCA AGGAGCTGGA 1140
TTGGAAAGGC AGCCTGACCC CATCACTTTG GGCATCTTTT GTGGGCCTGA ATAACTGTTT 1200
TCTCTCCTTT TTTGGGGATG CTGGGGATCC CTCCTCACGC TTACTCTGAC AATGATCCAC 1260
CCCTCCCTGA CCCAGTCTGT CTTAAAAACC AAATAGCTGA GAACCTGAAT TGGGGGGCCC 1320
ATTCCTTTCC ACTACGCACA CGCATGTCAC TGCATGCCCC TTCCACGTGC AAAATAAAGC 1380
AGCTAATGCT GTTTCTAGAA GGCAGCGCTG TGCTTCTGCG GCAGCAGCTC AGTTAGGTGC 1440
TTGCTTTGCA TGCCTGAGCA AACCCAAAAC CAAGGGAAAG ACAATTGATG GGAGTTTTCT 1500
TCCTCCCACG CGACGATACG AGACGGGGTC TTGGGAATCA AACTCAGGAT ATCTGGCTTG 1560
GTGGCAAGCC CCTTACGTGC TCGGCCCTCT CACTGCCCTA GCAACAAAAG TAAACTTAGA 1620
TTTATTATGT ATGTGTATGT GTGTTCTGCC TGCATGTATG CATATGCACC ATGTGTATGC 1680
CTTGTGCCCT TAGAGTTTAG AAGAGCGTAG AGTGTCCGAT CCCCTGGAGC TAGAGTTATG 1740
GATGACTGTG AGCCACCATG TGGGTGATGG GAACCCAACC TGGGTCAGCT TACCTAACCT 1800
TGAGTCACCT CTCCAGCCCC AGTGACATTA AAGTGAAAAT GAAGGCTCTG TGCTCAAAAT 1860
CAAACCTTCA GGCAGACTTC CCTGAAGCCT GAGGCACTCA GAGCCCATGG CATTATTATT 1920
TTTTTTAAGA TTTATTTATT TATTATATGT 1950