EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-11906

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr8:73029850-73030390

Target genes

Number: 19
Name	Ensembl ID

Crtc1	ENSMUSG00000003575
Klhl26	ENSMUSG00000055707
Crlf1	ENSMUSG00000007888
Uba52	ENSMUSG00000090137
Fkbp8	ENSMUSG00000019428
2810422J05Rik	ENSMUSG00000055553
Ell	ENSMUSG00000070002
Isyna1	ENSMUSG00000019139
Ssbp4	ENSMUSG00000070003
Lrrc25	ENSMUSG00000049988
Pgpep1	ENSMUSG00000056204
Lsm4	ENSMUSG00000031848
Jund	ENSMUSG00000071076
Rab3a	ENSMUSG00000031840
Mpv17l2	ENSMUSG00000035559
Ifi30	ENSMUSG00000031838
Pik3r2	ENSMUSG00000031834
Mast3	ENSMUSG00000031833
Rpl18a	ENSMUSG00000045128

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SP1	MA0079.4	chr8:73030066-73030081	CAGGCCACGCCCACG	+	6.49
SP3	MA0746.2	chr8:73030068-73030081	GGCCACGCCCACG	+	6.04
SP4	MA0685.1	chr8:73030066-73030083	CAGGCCACGCCCACGGT	+	6.24

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_01562

chr8:73026911-73082657

Th_Cells

Enhancer Sequence

CGGTGAGCTC TGCAGTGGAC CGGGAGGATG CTGAATCGAC ACGCTGACAA GCAGACCACG 60
CTCCCTGCTC CAGCTACGTG GAAGATACCC CCGACTCGAA AGAGACAAAC CCGAACTCCA 120
CAGACTGGGT CTGTCAGGAC AGAGCTAGTG CTTAACCATC TCTGCACTCA GAGAAATGAG 180
GGATCTTGTG GAGGGTCACA CCACAGCTGC TCCCGCCAGG CCACGCCCAC GGTCACATGC 240
TGCTCTACAC CTATCTACCC TGCTACTAAA AGCTACACCC TCAGCTCTAC CCAACTCCCC 300
CAAATAGACA GGCTTCAGTG TCACAGATCC TTTTACCCAC CCTTCTAGAC TTCGCTTTCA 360
AGTACGCCCT GCTCCCGGCA GCAGCACTCC TGCATCTCCT GGACCAGATC TGGCTCTCTC 420
CCCACCTCTT CCGACCAAGT CCACAACCTA GGTCCTCCCA GCCACGCCTC CAGCCGCCTC 480
CCCTCAGGTC CCCCTCAGGC AAGCTCTCCC AGGGCCCGCC CCCTCCTCCA GCCCAGCCCG 540