EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-11107

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr7:52958980-52959080

Target genes

Number: 23
Name	Ensembl ID

Snrnp70	ENSMUSG00000063511
Ftl1	ENSMUSG00000050708
Bax	ENSMUSG00000003873
Bcat2	ENSMUSG00000030826
Fgf21	ENSMUSG00000030827
Fut1	ENSMUSG00000008461
Izumo1	ENSMUSG00000064158
Rasip1	ENSMUSG00000044562
Mamstr	ENSMUSG00000042918
Fut2	ENSMUSG00000055978
Ntn5	ENSMUSG00000070564
Sec1	ENSMUSG00000040364
Dbp	ENSMUSG00000059824
Rpl18	ENSMUSG00000059070
Sphk2	ENSMUSG00000057342
Fam83e	ENSMUSG00000054161
Spaca4	ENSMUSG00000070563
Sult2b1	ENSMUSG00000003271
Lmtk3	ENSMUSG00000062044
Cyth2	ENSMUSG00000003269
Kcnj14	ENSMUSG00000058743
Emp3	ENSMUSG00000040212
Ccdc114	ENSMUSG00000040189

TF binding sites/motifs

Number: 4

TF

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr7:52958992-52959012	ACCCCCACCCCCCCCCACCC	+	6.27
RREB1	MA0073.1	chr7:52958993-52959013	CCCCCACCCCCCCCCACCCC	+	7.06
ZNF263	MA0528.1	chr7:52958993-52959014	CCCCCACCCCCCCCCACCCCC	-	6.28
ZNF740	MA0753.2	chr7:52958997-52959010	CACCCCCCCCCAC	+	6.09

Number of super-enhancer constituents: 8
ID	Coordinate	Tissue/cell

mSE_01543	chr7:52937991-52973995	Th_Cells
mSE_03907	chr7:52958216-52964371	Cerebellum
mSE_04062	chr7:52957945-52960312	Cortex
mSE_07329	chr7:52959064-52965460	Intestine
mSE_08395	chr7:52958837-52971793	Liver
mSE_09072	chr7:52959004-52964407	Lung
mSE_10851	chr7:52958167-52965433	Olfactory_bulb
mSE_12554	chr7:52959006-52964268	Spleen

Enhancer Sequence

CAGGTGACTG ACACCCCCAC CCCCCCCCAC CCCCGTGTGT GCATGCTACT CCTGTCCTGA 60
GCACCACCCC GGTCCACTCA CCCGTGGTTT CTCTTGAGGC 100