EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-11068

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr7:52270650-52271440

Target genes

Number: 18
Name	Ensembl ID

Atf5	ENSMUSG00000038539
Pnkp	ENSMUSG00000002963
Cpt1c	ENSMUSG00000007783
Irf3	ENSMUSG00000003184
Bcl2l12	ENSMUSG00000003190
Scaf1	ENSMUSG00000038406
Rras	ENSMUSG00000038387
Prr12	ENSMUSG00000046574
Nosip	ENSMUSG00000003421
Prrg2	ENSMUSG00000007837
Fcgrt	ENSMUSG00000003420
Rps11	ENSMUSG00000003429
Rpl13a	ENSMUSG00000074129
Aldh16a1	ENSMUSG00000007833
Dkkl1	ENSMUSG00000030792
Tead2	ENSMUSG00000030796
Cd37	ENSMUSG00000030798
Snrnp70	ENSMUSG00000063511

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr7:52270772-52270792	ACCCCACCCTACCCCACCCA	+	6.22
SP2	MA0516.2	chr7:52271387-52271404	CTCCGCCCCGCCCACCC	+	6.29
SP3	MA0746.2	chr7:52271390-52271403	CGCCCCGCCCACC	+	6.14

Enhancer Sequence

ATTCCCAGCG TTTTCTGTTA TTATTCTCTA CACATTTATC TACTCTTCAA AAGCACTTGA 60
ATTTCCTCCA AGACATAGAC TGTATTCTTG CAATCATTGG ACGATTCTAG TTCCTTCAAA 120
CTACCCCACC CTACCCCACC CACCCCTATC TCCGAGTCAC CCCCACATAA AACACTTCCC 180
AGACCTTAGC GACTCATTTA TGCCTCTGGG CACATCACAA AGCTTGCTTC CCTCTCCCTA 240
GGTGGGAGTA CATCTCTTTC TTCCAGGTGG ACCTTAACAC TTCCTAGTCC TTGAAGAGAG 300
CTTCCAGGCC TCATAAATGG TCCCAGATCC ATGTAGATGA GCCGAATGCA GAGGCCAGCA 360
TGAGGAGAGA CTTCCCAGCC CTAACAAATA CACCCCAGTG AACTAGGTGA CTCTGCAGAC 420
CCCCTTAACT CCTGGGGGAG TGAAGATCTC AAGATGGCCC CAAAAGCCTC TCAACAGACC 480
CTAGCCTACG GTCGCACATA AAAACCATCT ACGGCGCCTG CAGACGTGTC CAGGCTCAGC 540
AATGGGAAGG AGGGCCGGCC TAGTCGCGGT CCAGGCCATA CGAAAGCCCT CTGGCACCCA 600
CGGGCGCGTC CGGGGCCCTA AGAAGGCCCC CTACTCAGAG ACTGCCTTGG CCGCTGCAGC 660
CGGGTCCGAA GGTGCCACGC TACGCTCTCC AGGCCCCGTG GCATACGGGC GACACTCGGA 720
GACGACTAGC GACCCGACTC CGCCCCGCCC ACCCCGATAG GCCCGAGCCC CGCGGCCCGG 780
ACCGCCGCCG 790