EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-10574

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr6:124989910-124990590

Target genes

Number: 25
Name	Ensembl ID

Phb2	ENSMUSG00000004264
Ptpn6	ENSMUSG00000004266
Spsb2	ENSMUSG00000038451
Tpi1	ENSMUSG00000023456
Usp5	ENSMUSG00000038429
Cdca3	ENSMUSG00000023505
Lag3	ENSMUSG00000030124
Ptms	ENSMUSG00000030122
Mlf2	ENSMUSG00000030120
Cops7a	ENSMUSG00000030127
C530028O21Rik	ENSMUSG00000030329
Zfp384	ENSMUSG00000038346
Ing4	ENSMUSG00000030330
Acrbp	ENSMUSG00000072770
Chd4	ENSMUSG00000063870
Nop2	ENSMUSG00000038279
Iffo1	ENSMUSG00000038271
Gapdh	ENSMUSG00000057666
Ncapd2	ENSMUSG00000038252
Mrpl51	ENSMUSG00000030335
Vamp1	ENSMUSG00000030337
Tapbpl	ENSMUSG00000038213
Cd27	ENSMUSG00000030336
Ltbr	ENSMUSG00000030339
Tnfrsf1a	ENSMUSG00000030341

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr6:124990062-124990073	GGGGGCGGGGC	-	6.02
KLF5	MA0599.1	chr6:124990063-124990073	GGGGCGGGGC	-	6.02

Enhancer Sequence

GGACAGTAAG AGCCAACTGG AGAAGGGGGT CATGGGCCAT AGAGTGGTGT AGAGGGTCCA 60
GGTTGACAGA CTTCATGGCC CCGAGGTTCT GGTAGCCTGA AGATCACAGG AAAAGGGTTC 120
CGTGGGAAGA TTTATTCGAG GGGGAAGAGG GAGGGGGCGG GGCAGTGGGC TTAGAGGCCT 180
CGCTCAAGAT CTGGACGAGG GAAGGGCTGC TCCGTGGGAT CAGGGCTGGG CTTTAAAGGG 240
TTAGGGGTAG CAGGAAAGTA GTTGCTGACT CAGTTCTTGA GGGTAGATTT TTTTTCCCCC 300
CTAAGTTGTG CAGCGTCGTT ACTTACGCAC TGCCATTTGG AGCAGCTGCA GATATTCGAC 360
CTAATTCCTT TAGTCATTTA TATCTCAAAA GTTGCTCCTC ATTAAGCTTG CTGGGTGGAA 420
TAGAGCGACC ACTGAGTTGA TCGCTGAAAT GCTTTACTTT ATGAGCAAAA TCCAGTTCTC 480
AAAAAATGAG GAATATGTCT GTCTGTCTGT CTCCTCGCCT CCCTGGTCTT CCCCCTCCCC 540
CGTCGTGTGT GTGTGTATGT GTGTATAGAG ACTGGGAAGT GAGAAATCGG CTGGGGATAT 600
ATTAGACTTT TAGGCAACTC TTAACCTGGG CATCTTAAAA TAGAGCATTG ATTTTAATAA 660
AAGAAAGTAA CTGATCAAAT 680