EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-10201

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr6:52195810-52195980

Target genes

Number: 13
Name	Ensembl ID

Hoxa1	ENSMUSG00000029844
Hoxa2	ENSMUSG00000014704
5730596B20Rik	ENSMUSG00000056468
Hoxa4	ENSMUSG00000000942
Hoxa5	ENSMUSG00000038253
Hoxa6	ENSMUSG00000043219
Hoxa3	ENSMUSG00000079560
Hoxa7	ENSMUSG00000038236
Hoxa9	ENSMUSG00000038227
Hoxa10	ENSMUSG00000000938
Hoxa11	ENSMUSG00000038210
Hoxa13	ENSMUSG00000038203
Evx1	ENSMUSG00000005503

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

MITF	MA0620.2	chr6:52195858-52195876	GCTGGTCATGTGACCCGA	+	6.12
MITF	MA0620.2	chr6:52195858-52195876	GCTGGTCATGTGACCCGA	-	6.12
XBP1	MA0844.1	chr6:52195819-52195833	GCTGACGTGGAAAT	-	6
ZNF263	MA0528.1	chr6:52195941-52195962	TTTTTTCCCCTCCCCTCCCTC	-	6.07
ZNF263	MA0528.1	chr6:52195945-52195966	TTCCCCTCCCCTCCCTCCTCG	-	7.3

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_05522

chr6:52192317-52204807

E14.5_Limb

Enhancer Sequence

GAGACGTAAG CTGACGTGGA AATCTATCCC CATCCTTAGC AGGGAGGTGC TGGTCATGTG 60
ACCCGATGTT GAAATTGACA AGCCGCGAGC TAGTCCCGGC TTTTTTTTTT TTTTAACCCC 120
CCTCCCTTTC CTTTTTTCCC CTCCCCTCCC TCCTCGGCTT CCTTTCTTTG 170