EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-10147

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr6:42215190-42216260

Target genes

Number: 5
Name	Ensembl ID

Gstk1	ENSMUSG00000029864
Tmem139	ENSMUSG00000071506
Casp2	ENSMUSG00000029863
Fam131b	ENSMUSG00000029861
Zyx	ENSMUSG00000029860

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Crx	MA0467.1	chr6:42215558-42215569	GAGAGGATTAG	+	6.02
TFAP2A	MA0003.3	chr6:42216053-42216064	TGCCTGAGGCA	-	6.02
ZNF263	MA0528.1	chr6:42215197-42215218	TGAGGAGGGCAGAGGAGGGGA	+	6.22

Enhancer Sequence

GAGCAGGTGA GGAGGGCAGA GGAGGGGAGG CGGCCAGGCG AGCGGCGCGG CTTCTTGGCC 60
TGGTGCCGCG TGTACAGGGG CTGCAGCAGC CTCCCTTTGT CCAGCGCAGA GGAGTCTATG 120
AGAGCGATCT TGTCCGTCCC GCGCTACTTC TCGCCTGCGG CATCTCACCT TTTCCAGAGA 180
TGCTCCGGCT TTTCCTTCCA GTTCTTAGCT GAGGACTTAA ACTCATTTCT CTTTAAAAAC 240
CAGAGACTTC GCAGCTCGGC CTTGGGCGCA TTTGACTTGG ATTGACTATC TCGTGCCCTG 300
CACTGCTTTC TCATATAATA GATGTTTGTC AGAGAGTTCC ACACAGGTTT GGGGGATTTG 360
AATCCTTTGA GAGGATTAGA TGGTTCCCGT TTCTCCGCCT CCTCCGTCAG TTTCGATGAA 420
AACATTGCAC AGGACGACAC AATTTTATTG TTTCCTGTCC AGACCTCTAA CATTAATATA 480
GAAACGGGAA CTCTTACAGG ACACGGAATC AAAGCGTTAG AAACCTCTCG GTGTTCTTTT 540
TCTCCATTCC ACTTTTCATG GGTGCCCTAA AATTCCAGGT GACTGGAAAC TTCGGGAAAG 600
TTCATATTTT AAGCCTGGTA GTTTGAGATA AAAGGAAGTG GCAGGTGTGC GGAGTAGGTG 660
GAGCCTCAGA TAAAACACGG TGACGACTGC TTCGTTAAAA ATTCAAGCCT GGGACATAAG 720
AGGATTTAGA ACTGGAGTCA GTAAATTGTA CCTGAGGATG CAATTGTCTA GAGAAAAGCC 780
CCCTCCCCTT TATTTTTTTG CAAGGGTGTC CTAGTGCAGG GCCAGCATTT AAAGGCTACA 840
AGGCTGTAAT CCTGGCATCC TGATGCCTGA GGCAAGAGAA TCAGAAACTG AAAATGAGTT 900
TGGTCTCCTG GTCTAGTCCT GTCAAAGAGA ATGAGGTGTT GGGGGAGAGG TCAGGTGCCC 960
TCTACAGGAA ACCGGAACAT GGCTAGCCAA CTGAAACTGG AGAGAGCAGT AGAGTGGAAG 1020
TCGAGGAAAT GAAGCCGCTT AAGAAATGGA TCTTCCTAAT GACCTAAGAA 1070