EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-10078

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr6:29558900-29559360

Target genes

Number: 8
Name	Ensembl ID

Ccdc136	ENSMUSG00000029769
Flnc	ENSMUSG00000068699
Atp6v1f	ENSMUSG00000004285
Kcp	ENSMUSG00000059022
Tnpo3	ENSMUSG00000012535
Tspan33	ENSMUSG00000001763
Smo	ENSMUSG00000001761
Gm13717	ENSMUSG00000081564

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nkx3-2

MA0122.3

chr6:29559092-29559105

AAAAGCACTTAAA

6.03

Enhancer Sequence

ACCATAACTA ATTTTTCTTT ATATTACGTT GCACTCCAAT GAGAGGAGAA AATTTGTACG 60
AACACGAATC TAGAAGCCTG AGAAATTTCG AGAATAACAC GAATGAAAAT CGGCAAGGGA 120
CACTGAGGGG TGAGTAAGGC TGCCAAAGGG AAGGTATTGC CAGATGCAAC TCTTGAATAC 180
GGAAGGTGTA CCAAAAGCAC TTAAAGGAGA GCCAGACCAC AAGCGAGACG TACAGAACTA 240
CAAAACGGAT TCCACAGACG AGGGAAAGGG CCCGTTCGTG ACCAATCAGT TGCCACTGGT 300
TTCCGAAAGG CAGCACATCT GTGGCTGCTC AGCCCCACCC CGCGGCACCA GCTCCTTCGG 360
AAAGAGGATC TCCCACTGCC AAGCGCTCCA CTCAAGCGGA GAACCATCCC ATCCCACTCG 420
GCCCTGGTCC CGCGCGGCTC AGAACGGACT CTCCCCGAAC 460