EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-09158

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr4:155109250-155109500

Target genes

Number: 13
Name	Ensembl ID

Slc35e2	ENSMUSG00000042202
Gm10563	ENSMUSG00000073682
Mmp23	ENSMUSG00000029061
Mib2	ENSMUSG00000029060
Ssu72	ENSMUSG00000029038
Atad3a	ENSMUSG00000029036
Vwa1	ENSMUSG00000042116
E230028L10Rik	ENSMUSG00000078487
Ccnl2	ENSMUSG00000029068
Aurkaip1	ENSMUSG00000065990
Dvl1	ENSMUSG00000029071
Tas1r3	ENSMUSG00000029072
Pusl1	ENSMUSG00000051557

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

PLAG1	MA0163.1	chr4:155109443-155109457	CCCCCTTGGCACCC	-	6.22
RREB1	MA0073.1	chr4:155109407-155109427	TCCCCACCCACCCACCCACC	+	6.91

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_03788

chr4:155107957-155110968

Cerebellum

Enhancer Sequence

TGATGGTGAG CGGAGGGGCT TCCCGCGCGC GCCCCCTGCT TCTGCCGCCC GCCCGCGCGC 60
GCGCCTACCC CACCTCGCTT CCTTGTTTAC CGGCCCGTGC GGCCTGCGCT GCCCTCGCTG 120
CGATCTTGCG CTGCCCTCGC CCTGGTTGCC CTGCGTTTCC CCACCCACCC ACCCACCCCT 180
GCAGTCTAGT ACTCCCCCTT GGCACCCCTT TCGGCCCGGC CCACTCCTCG CCCTGACCGG 240
TCATGGGCTC 250