EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-08930

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr4:132995340-132996030

Target genes

Number: 12
Name	Ensembl ID

Wasf2	ENSMUSG00000028868
Sytl1	ENSMUSG00000028860
Tmem222	ENSMUSG00000028857
Gm13259	ENSMUSG00000083241
Wdtc1	ENSMUSG00000037622
Slc9a1	ENSMUSG00000028854
Trnp1	ENSMUSG00000056596
1810019J16Rik	ENSMUSG00000037600
Nudc	ENSMUSG00000028851
Gpatch3	ENSMUSG00000028850
Sfn	ENSMUSG00000047281
Gm13213	ENSMUSG00000083885

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Klf12	MA0742.1	chr4:132995529-132995544	GACCACGCCCAGTTT	+	6.55
ZNF263	MA0528.1	chr4:132995399-132995420	TCTTCTCTCCCTCTCTCCTCT	-	6.48
ZNF263	MA0528.1	chr4:132995365-132995386	TCTCTCTCTTCTCTCTCCTCT	-	6.4
ZNF263	MA0528.1	chr4:132995712-132995733	TCCTCCTCCTCCCTTTCCTCC	-	8

Enhancer Sequence

TCTTTCCTCT CTCCTCTTTC TCTCCTCTCT CTCTTCTCTC TCCTCTCTTC TCTCTTCTCT 60
CTTCTCTCCC TCTCTCCTCT CTCTCTCTCT CTGATACAGG TTCTGGCTTG TAACTCTGTG 120
TGGGCAGGGA TGGCCCTGGA CTTCTGATCC TCCCACCTCC TCCCCAGTAC TGGAATCCCA 180
GGAATACACG ACCACGCCCA GTTTTATGAA ATACTAGGGA TCAAACCCAG GGCCTCAGAC 240
ATCTGTAGCT CATTCCTAGC TCGTTGGGAG CCTCTTGTCA AAGGCTGTAG TACTTTGAGG 300
AACAGTCAAG GGGGCCAAAG CCTTCTTTCC TACACAGTCC AGCCCACCTA GAACGGCAGT 360
ATCCACCAAG CATCCTCCTC CTCCCTTTCC TCCCAGGTAC TGCCCTGGAC AAGAGCAGAA 420
TCCTGCAAGG CTGCTGGGAG CCTGGCCCAG GCCCCTCTCC CTTTCCACAA GCCCCTGCCG 480
CATCCCTAGA GGCCTCCTTC TCTGCTTACT CTCAGGGGAC AGGCTGCAGG AGCATAGCAA 540
TTGCTTAGGA CTGGGACTGG CTGCTTGCAG GGGCCATCTG TTCACAGGCT GTGGGGAGGC 600
GCAGAGCTGT CTGAGAAATG ACCTCGAAGG CTCATCCTGG GTTGCTTGGC AACTAGCAAG 660
CAGGGGATTA GTGGTTTCCT GTTCCTCAAG 690