EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-08100

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr3:108012260-108013260

Target genes

Number: 10
Name	Ensembl ID

Gstm6	ENSMUSG00000068762
Gstm1	ENSMUSG00000058135
Gnai3	ENSMUSG00000000001
Amigo1	ENSMUSG00000050947
Cyb561d1	ENSMUSG00000048796
Sypl2	ENSMUSG00000027887
Gm12501	ENSMUSG00000083462
Psma5	ENSMUSG00000068749
Sort1	ENSMUSG00000068747
Psrc1	ENSMUSG00000068744

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

PLAG1	MA0163.1	chr3:108013199-108013213	GGGGCCCTGGGGGG	+	7.03
SP2	MA0516.2	chr3:108012786-108012803	GAGGGGGCGGGGGTTCG	-	6.69

Enhancer Sequence

ACTCTCTAAT GCTCACTAAC AGAGTGGCCC CTTTCTAGGA TGAGAAGATT ATTGGCAATC 60
ATAATACCCA GATGTAAGTG GTAGTGGGTT AGGCATGCAA AAGATAAGGG GCAGCTCCCA 120
CTCTTTTAAG TCCCTTAAAT TCAAGTGTGG GGAATGACAG AACAGAGCTG TAAGTCAGAG 180
GTCTCAAAAG AGAACAAGTG GCATTAGAGA CCGCTCCATG AGATCTCCTC CTCCACCTCT 240
TCTCACTTGC AAACTTCTTC AGGGGTGTGA TGCTTGTTGT CACCCCGAAA GGCCACGAGG 300
CCAGGTGCTC CCTGGGGCCC AGGAGACAAA GATCAGAAGG GGCTGCAGGC CTGCTCACCA 360
AAGACACTCA AGGGCCTACA GAAAATAGGG GTCAAGGAAG AGAGCCAAGG GGCAGGACAA 420
GAGGCCCAGG AAAGGATGGA GGCTTGGAGT CATGTATGGA TGGACTGATA GAGGGAGGTC 480
GGGAGGATGG ATGGATGGAT GGATGGAGGA TGGATGAACT AAAGCAGAGG GGGCGGGGGT 540
TCGGGAAAAC TGAGCAGACA GGGAGACGTT GAAAGAAGCT AAGGTGCGGG GCAAAAGGCG 600
AAGAATCAAG TGGGTGGGGA GGGGGGCACA GAAGTGGGGT GCGTGGGAAA CACGTGGAGA 660
GGACTGTTGC AGATGGGTAG AGCCGGAGCA GGTGCAGAAC CGAAAAAAGC TGGAGGACGG 720
CTCACGAGAA GAAAGATAAA GGCAAGTAAA GTGGGGGGCA GGTACTGTAC ACCCGCAGAG 780
ACAGAGGTGG GCAGGGTGGG CTGCGAGCGA TACGCCGGCG CTAGGACCCG GAGGCGCGAA 840
GGTGTCTGAG CAGGCGGGCA CTAGGACCCG GCGGGTCCTT TGTTTGGGGG GCCGGGGAGC 900
CGGACGGCGG CTCTAGTCGG CGGCTCCCCT CAGCTGGAGG GGGCCCTGGG GGGGAGGGGA 960
GATAGTGATG GGGTCCCCGG ATTCTAATGT GTCTGTACTC 1000