EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-07922

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr3:89882950-89883440

Target genes

Number: 10
Name	Ensembl ID

Atp8b2	ENSMUSG00000060671
Hax1	ENSMUSG00000027944
4933434E20Rik	ENSMUSG00000027942
Ubap2l	ENSMUSG00000042520
Tpm3	ENSMUSG00000027940
Rps27	ENSMUSG00000090733
Rab13	ENSMUSG00000027935
Creb3l4	ENSMUSG00000027938
Slc39a1	ENSMUSG00000052310
Dennd4b	ENSMUSG00000042404

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SP1	MA0079.4	chr3:89883373-89883388	CAAACCCCGCCCCCT	+	6.49
SP2	MA0516.2	chr3:89883372-89883389	CCAAACCCCGCCCCCTT	+	7.08
SP4	MA0685.1	chr3:89883373-89883390	CAAACCCCGCCCCCTTT	+	7.15

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_07586

chr3:89882713-89888321

Intestine

Enhancer Sequence

GTACTTATGG ATACGTGCCA CTAGGCTAGT TTAAGTGCTC CTGGAGATTC AGCCCAGGGC 60
TTCGAATGTG CTTGGCTAGT GCTTTACAAA CTGAGCAATA TCCACAGCTC CTCCTAATAG 120
ATTTTCAAAG GACCTCACTG GGACTCCTTG CAAGGTGAAG GCTAGAGTCT TCTGTCTAGG 180
CTTGTCTCAG AACCTGGTTT TGGAATCTGT CCTAGACTGA GTAGAAGTGG AAGCACATGG 240
GATATTTTAA ATTGCGGAGC GGGAGCAGAC GCAGTGGTAG GGAGGCACCG GATAAGAGAG 300
GGGTCAACTG CGTAAGTGTT CACGACAGCA CCATTTTAGT AAATGGGACA GCCATTGTTA 360
CGAGACAGCC TGGTGGGTGA GGCTAGACTA TGAAGCGCCT CTCAGTTACT ATGGTAGCCT 420
TACCAAACCC CGCCCCCTTT ACTGGACTAA GGAAAGACGG CCCTGAGTGG TCGCCTAGGG 480
TTACTGGGAG 490