EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-07902

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr3:89197560-89198210

Target genes

Number: 24
Name	Ensembl ID

Fdps	ENSMUSG00000059743
Hcn3	ENSMUSG00000028051
Clk2	ENSMUSG00000068917
Scamp3	ENSMUSG00000028049
Fam189b	ENSMUSG00000032657
Gba	ENSMUSG00000028048
Thbs3	ENSMUSG00000028047
Mtx1	ENSMUSG00000064068
Muc1	ENSMUSG00000042784
Krtcap2	ENSMUSG00000042747
Trim46	ENSMUSG00000042766
Dpm3	ENSMUSG00000042737
Slc50a1	ENSMUSG00000027953
Efna1	ENSMUSG00000027954
Efna3	ENSMUSG00000028039
Efna4	ENSMUSG00000028040
Adam15	ENSMUSG00000028041
Zbtb7b	ENSMUSG00000028042
Flad1	ENSMUSG00000042642
Cks1b	ENSMUSG00000028044
Shc1	ENSMUSG00000042626
Pygo2	ENSMUSG00000047824
Pbxip1	ENSMUSG00000042613
Pmvk	ENSMUSG00000027952

dbSUPER

Number of super-enhancer constituents: 5
ID	Coordinate	Tissue/cell

mSE_03433	chr3:89197359-89199337	Bone_Marrow
mSE_07195	chr3:89190663-89200490	Intestine
mSE_09895	chr3:89197334-89201121	MEF
mSE_11586	chr3:89197318-89200125	Placenta
mSE_12143	chr3:89197336-89199235	Spleen

Enhancer Sequence

CTTTCTACCA CTATCTCCTC CGGTCCACCT TAACTGGAGC TCCGCCTCCG ACCCCCGTCC 60
AGCCCTCTGC TGCTGCCCAG CTCCACCCCT TGCACGCCAC CGCCCTGCCC ATCCATTGGC 120
CTGAACACCC GCCTATCCCA TGTGGGACGC GCCTAGGGTT CATCCAGGGA GGGGGTGGAG 180
CCTGGGCTGG CCAGAAACCA GAAGGGGAGG GAGGCCGAAG ACAGTGTCCG CAGTGGCCAG 240
GGAATGGAGC AGCCCCCTCA GGGACTTCCT CTCTTTCAAG AGGGGCTTCT GTAGGGTCAC 300
CACCTGGGGA GGGAATGGTA TGAGAGGTTA CGGATACGCT GCTGGGGATG AAGACCTAAA 360
ATTTAGAAAG AGTGGGGTCC TGCCGAGGGG CTTTAACCAG GTCAGAGCCC CAGGAAGAGA 420
GAGAACCTCT AGACATTGAG CTTCAGCCTC TTGGCCCATC CCCCTCCGAG GGAGCGGGGG 480
AGTCGAGTCT GTGGGCACTC TGTGTCCCTC CCCACGCGTG ACGGCGCCCC GCGGGGAGGG 540
AACAGTGCCC GGGGCAAGGA GCCTTTGCGC TCTAGCCAGT GCCCGTTGCT GCCTTGGCAT 600
TTTCAAAGGG GAGGGACTGA GTCTGGGAAG GGGAAGGGGG AGGTGCGCTC 650