EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-07896

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr3:89071000-89071200

Target genes

Number: 27
Name	Ensembl ID

Rusc1	ENSMUSG00000041263
Fdps	ENSMUSG00000059743
Pklr	ENSMUSG00000041237
Hcn3	ENSMUSG00000028051
Clk2	ENSMUSG00000068917
Scamp3	ENSMUSG00000028049
Fam189b	ENSMUSG00000032657
Gba	ENSMUSG00000028048
Thbs3	ENSMUSG00000028047
Mtx1	ENSMUSG00000064068
Muc1	ENSMUSG00000042784
Krtcap2	ENSMUSG00000042747
Trim46	ENSMUSG00000042766
Dpm3	ENSMUSG00000042737
Slc50a1	ENSMUSG00000027953
Efna1	ENSMUSG00000027954
Efna3	ENSMUSG00000028039
Efna4	ENSMUSG00000028040
Adam15	ENSMUSG00000028041
Dcst1	ENSMUSG00000042672
Zbtb7b	ENSMUSG00000028042
Flad1	ENSMUSG00000042642
Cks1b	ENSMUSG00000028044
Shc1	ENSMUSG00000042626
Pygo2	ENSMUSG00000047824
Pbxip1	ENSMUSG00000042613
Pmvk	ENSMUSG00000027952

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6(var.2)	MA0728.1	chr3:89071068-89071083	GAGGTCAAGAGGTGA	+	6.62
RREB1	MA0073.1	chr3:89071035-89071055	GGGTGGGGGGTGGGATGGGG	-	7.54
Rarb	MA0857.1	chr3:89071067-89071083	AGAGGTCAAGAGGTGA	+	6.55

Enhancer Sequence

ATCTTGTGTA GTTTTGAGTA TGGAGGATAG CGGTGGGGTG GGGGGTGGGA TGGGGATTCT 60
ATATACTAGA GGTCAAGAGG TGAGGGGGCA GGAGAACCAC CTTACCAGGC CTTACTTAGC 120
TTTGCATTTT GATGGTGTTC TGTTCCCTTC TCAAGATTTT TTTTCTGTTT GAAATAGGAT 180
GCCATGTACC CTAGACTGGC 200