EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-07892

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr3:89019240-89019700

Target genes

Number: 28
Name	Ensembl ID

Ash1l	ENSMUSG00000028053
Rusc1	ENSMUSG00000041263
Fdps	ENSMUSG00000059743
Pklr	ENSMUSG00000041237
Hcn3	ENSMUSG00000028051
Clk2	ENSMUSG00000068917
Scamp3	ENSMUSG00000028049
Fam189b	ENSMUSG00000032657
Gba	ENSMUSG00000028048
Thbs3	ENSMUSG00000028047
Mtx1	ENSMUSG00000064068
Muc1	ENSMUSG00000042784
Krtcap2	ENSMUSG00000042747
Trim46	ENSMUSG00000042766
Dpm3	ENSMUSG00000042737
Slc50a1	ENSMUSG00000027953
Efna1	ENSMUSG00000027954
Efna3	ENSMUSG00000028039
Efna4	ENSMUSG00000028040
Adam15	ENSMUSG00000028041
Dcst1	ENSMUSG00000042672
Zbtb7b	ENSMUSG00000028042
Flad1	ENSMUSG00000042642
Cks1b	ENSMUSG00000028044
Shc1	ENSMUSG00000042626
Pygo2	ENSMUSG00000047824
Pbxip1	ENSMUSG00000042613
Pmvk	ENSMUSG00000027952

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

INSM1	MA0155.1	chr3:89019293-89019305	TGCCCCCAGGCA	-	6.04
TFAP2A(var.2)	MA0810.1	chr3:89019293-89019305	TGCCCCCAGGCA	+	6.74
TFAP2B	MA0811.1	chr3:89019293-89019305	TGCCCCCAGGCA	+	6.11

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_01437

chr3:88963927-89055714

Th_Cells

Enhancer Sequence

TTCAGGGTAA GCCTGCATTC ATCCCCCTTG ACACCTCTTT GTCTCCTTTC TTTTGCCCCC 60
AGGCAAATAA CAGACCACAT GTGAGTTTGA GAGAGAGGGA AGAGTCCTGA AATGGGTTGG 120
AGAGAAAAGT TAACACTGCG AAGAGTGAAG GGTTGGTGAT AATGTAGGAG GGGTGGGCAC 180
CAGAGTGGTG GGTGAGTGCA GATTGGTGCA GTGTCAGGCA CTGAGACCAG GATGGATCCA 240
GGAGGACTCC ACGACAGAGT TAGTCTCAGA GCATCAACAG GATAGTCTGG GCAAGCAGCT 300
TGATTGATGG TGACTGCACG GTGGGGGACC CTGGGCTTGG TTCCCCCCCC CTTTACTCTG 360
GCTCTTGGTT TCTAAAAGAT AGGGCGGGGG TGGGGATTGG GCAGCTTGAA CTCTCCCGGA 420
GGTCTGGTGG GGGGATGGCC CATGGGTGGT GTAGGAGAGG 460