EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-07891

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr3:89017230-89017730

Target genes

Number: 24
Name	Ensembl ID

Rusc1	ENSMUSG00000041263
Fdps	ENSMUSG00000059743
Hcn3	ENSMUSG00000028051
Clk2	ENSMUSG00000068917
Scamp3	ENSMUSG00000028049
Fam189b	ENSMUSG00000032657
Gba	ENSMUSG00000028048
Mtx1	ENSMUSG00000064068
Muc1	ENSMUSG00000042784
Krtcap2	ENSMUSG00000042747
Dpm3	ENSMUSG00000042737
Slc50a1	ENSMUSG00000027953
Efna1	ENSMUSG00000027954
Efna3	ENSMUSG00000028039
Efna4	ENSMUSG00000028040
Adam15	ENSMUSG00000028041
Dcst1	ENSMUSG00000042672
Zbtb7b	ENSMUSG00000028042
Flad1	ENSMUSG00000042642
Cks1b	ENSMUSG00000028044
Shc1	ENSMUSG00000042626
Pygo2	ENSMUSG00000047824
Pbxip1	ENSMUSG00000042613
Pmvk	ENSMUSG00000027952

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RARA(var.2)

MA0730.1

chr3:89017484-89017501

GGGTTATCCCAAGGTCA

6.1

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_01437

chr3:88963927-89055714

Th_Cells

Enhancer Sequence

TTTCATTATT TGCTTACATG TTTGCCTTTC TGTTAACAAT TTCAATACAA GGGTCAAAAT 60
CGTATTGCAA GGGAATGTTT TTTACTCTAA GAGGCATAAT AAATGTTTTT TGCAATCCCG 120
AAGACGTTGA ATGAAGAGAA GCAAGTCTGC CTAGTTCTAA AGGTCTTCCT ACACAGTCTG 180
GCTGTGGGGC TGTCTGGTCT ACGAAAACGA GATTCAATGG ATTCATAGCG GAAAAAGAAG 240
AGATCGTCCA GAAGGGGTTA TCCCAAGGTC ACCCAGCCAA TAAATGGATA GGCAAGGTCT 300
AAACCCATCT TCTGAAGCCC TGACCAAGCC TACTTCCACT GCTACACAAA TCGATCCTAG 360
GAAATCCGGA CGTAAGGCGC GGAGCCCACA TCGGCCTTCG ACTGCCTCAG TTTCTCTCAA 420
GACGCATGCG TCTCGGTTCT CGGCAAAGCT CGAGCACCCA CTCCGGCTCT CCAGAGATCA 480
GAGGACAGGT GCATGAGCCC 500