EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
MM061-07491 
Organism
Mus musculus 
Tissue/cell
Forelimb_bud_embryo 
Coordinate
chr2:165698640-165701200 
Target genes
Number: 3             
NameEnsembl ID
TF binding sites/motifs
Number: 24             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
CrxMA0467.1chr2:165699638-165699649AAGGGGATTAG+6.32
EBF1MA0154.3chr2:165699462-165699476GGTCCCTGGGGACT-6.38
FOXP1MA0481.2chr2:165699906-165699918AAGTAAACAGAA+7.22
FOXP2MA0593.1chr2:165699906-165699917AAGTAAACAGA+6.32
IRF1MA0050.2chr2:165699888-165699909AAAAAGAAAAAGAAAGGGAAG-6.59
KLF4MA0039.3chr2:165700119-165700130CCACACCCTGC+6.62
Klf1MA0493.1chr2:165700117-165700128AGCCACACCCT+6.02
ZNF263MA0528.1chr2:165700266-165700287TCTTCCTCTTCCTCCTCCTCC-10.47
ZNF263MA0528.1chr2:165700263-165700284TCCTCTTCCTCTTCCTCCTCC-10.52
ZNF263MA0528.1chr2:165700223-165700244CTCGCCTCTTCCTCCTCCTCC-6.26
ZNF263MA0528.1chr2:165700241-165700262TCCTCCTCTTCCTCTTTCCTC-6.26
ZNF263MA0528.1chr2:165700275-165700296TCCTCCTCCTCCCATTCCCTC-6.37
ZNF263MA0528.1chr2:165700251-165700272CCTCTTTCCTCCTCCTCTTCC-6.66
ZNF263MA0528.1chr2:165700248-165700269CTTCCTCTTTCCTCCTCCTCT-6.76
ZNF263MA0528.1chr2:165700245-165700266CCTCTTCCTCTTTCCTCCTCC-7.04
ZNF263MA0528.1chr2:165700279-165700300CCTCCTCCCATTCCCTCCTCC-7.05
ZNF263MA0528.1chr2:165700254-165700275CTTTCCTCCTCCTCTTCCTCT-7.53
ZNF263MA0528.1chr2:165700238-165700259TCCTCCTCCTCTTCCTCTTTC-7.87
ZNF263MA0528.1chr2:165700257-165700278TCCTCCTCCTCTTCCTCTTCC-8.44
ZNF263MA0528.1chr2:165700235-165700256TCCTCCTCCTCCTCTTCCTCT-8.58
ZNF263MA0528.1chr2:165700232-165700253TCCTCCTCCTCCTCCTCTTCC-8.67
ZNF263MA0528.1chr2:165700226-165700247GCCTCTTCCTCCTCCTCCTCC-8.95
ZNF263MA0528.1chr2:165700260-165700281TCCTCCTCTTCCTCTTCCTCC-9.18
ZNF263MA0528.1chr2:165700229-165700250TCTTCCTCCTCCTCCTCCTCT-9.73
Number of super-enhancer constituents: 23             
IDCoordinateTissue/cell
mSE_02965chr2:165673395-165721899TACs
mSE_03405chr2:165699735-165701128Bone_Marrow
mSE_03696chr2:165698575-165701441Cerebellum
mSE_03993chr2:165698207-165703987Cortex
mSE_04397chr2:165699798-165703894E14.5_Brain
mSE_04806chr2:165699879-165701340E14.5_Heart
mSE_05515chr2:165698714-165699485E14.5_Limb
mSE_05515chr2:165699688-165701382E14.5_Limb
mSE_06104chr2:165700460-165701131E14.5_Liver
mSE_06618chr2:165698158-165701408Heart
mSE_07159chr2:165698676-165701403Intestine
mSE_07959chr2:165697902-165701420Kidney
mSE_08403chr2:165698158-165701316Liver
mSE_08958chr2:165698156-165701399Lung
mSE_09405chr2:165699985-165701228MEF
mSE_10037chr2:165698734-165703929Embryonic_stem_cells
mSE_10698chr2:165698477-165704000Olfactory_bulb
mSE_11189chr2:165698257-165703014Placenta
mSE_12078chr2:165698767-165699505Spleen
mSE_12078chr2:165699902-165700355Spleen
mSE_12078chr2:165700410-165701214Spleen
mSE_12617chr2:165698185-165700234Testis
mSE_12617chr2:165700294-165701295Testis
Enhancer Sequence
GAAAACTGAG GAAGTCCGAA TCCAGTGTGG GCTTTATAAA TCCAGGACAT TTAGATGTGC 60
CAAGTCGGAC AGAAGCAGGC AGCCTAGAGA GGGGTGAAGG GGGGTGGGGT GAAGTAGGGC 120
TGCATAAGGA TTCTTGAAAT CTAAAACTCT TAAAATGAGC TTACTCTAAA ACCAGGACTC 180
AAAAGGGGAG AACGGCTCCC TCAGAATGGA CAGCCACCGA AAGCCTTTCT AGCAACATCT 240
GTGTTGAATC TGTGTGATCC GGAGCAGGCT GCCAGAACCC AGGACAGCAT GTTCCAGAAA 300
GACAGAGACA CAAACTCCCA AGGACAAACA GAAGGACACA GGGAACAAAG CTGGGAAGAG 360
ATGGTACAGG TGAACGGGTG TCACAGGGAA ATGGAGAGGC AGGTCCTGGT GACATTGGAG 420
ACGACAAGCA GAAGGATACG AGAAGGTGGG TGGAGGGAAG ATAACCTGAG TGAGGACAGG 480
TGCCTGTGTA CACGTGCACA CACGGATGGA GTCTCGAGGT CAACCTCAGG CCTTACTCAG 540
GTGCTGTCTG TCTGTCCACC CACTGTATTT CCCCAGAGGC CTCACACTGA GACCAGAGAC 600
TCAAGGCAGG ATTTTTACAT AAGTTCTGGA CATGACCTCA GGGCCTCAGC AAGCACTTTC 660
CCACTTGAGC CATCCCCTCA GCCCTACAGA ACGGTCCTCA GTGCCCTGGG GAAGTCATCC 720
AGAGCTGGCA AGCAGACAGA GGGAAAACAG CATTTCATTA CGAACCAGGC ACTTCTTGGT 780
GTGTAATGAC AGAAAAGGTC TCCACAGTGG GCAAGACAGG CAGGTCCCTG GGGACTTTTC 840
CCAAGTTGGT GGCCTATGAC TGTGGTCCTT CTGGAGGTTT TACTCTGCCT CCTGAGGAGA 900
GTCCAGGAAT GAGGAAGTCT CGACACAGCC TCCCTGACTG AACACCCATT AGAGACTCTG 960
GTGTTCTCAC CTGCAGGGTG GGGTACCACT CACCCCAGAA GGGGATTAGA CAGGCCAAAC 1020
ACTAGAAGGC TCCTGTGTTG TCCCACAAGC CTTCAAACAT ACCAGTACCT TTATCCTAGA 1080
CAGCCTTAGG TAGGAGGCAC CTGAAATAGC AAGTACACAC CTTTAACTCC AGCACTCAGG 1140
AGGCAGAGGC AGAGGCAGAG GCAGGTGGAT TTCTGTGAGT TCAAAACCAA CAGGATCTAC 1200
AGAGTGAGTT CTAAGCCAGC CAGAGCTGTG TCGTGAGACC CTGCCTCCAA AAAGAAAAAG 1260
AAAGGGAAGT AAACAGAAGA CAGATGGACA GACAGACAAA GATGAAGACC CAACACCACC 1320
CGGCCCCCCT CTTTATGGAT TCTCTCTCCC TCATCCTCTC TTCTCTGTCC CGTGTCATCA 1380
GAACACGTCT CATAGGCCAA TCCTGATCAC AGCAGCAGGC CTTCAAGGGG CTGCCTCAGT 1440
CAGTCCTGAC CGACTGTCTG CAAAGGCTCT GGTGGGAAGC CACACCCTGC CCCAGCTCCC 1500
TGGGTTCCTC GCCACTTGGA ACAATGAAAC TCAGATGACC TATACATGCT GGGACAGCTG 1560
AGGCAGGGGA CAAGCCAATG AGCCTCGCCT CTTCCTCCTC CTCCTCCTCT TCCTCTTTCC 1620
TCCTCCTCTT CCTCTTCCTC CTCCTCCCAT TCCCTCCTCC CAGCCAGCTC TGTGTGACCA 1680
CCTGACCCCT AGTTTGACCC AAATAATAGA CCGCCTTTTC TTTTCTTTTT TTTAAAGCTC 1740
TAGGATGCTC TCTTTTCTTT CAGGCGCCTC TAGGAAGTGC TATTTTATGA CTTCCTGGCC 1800
AGATGAGAGC CTCCTCCTGG AAGGATCTGT AACAACCCTC CCCGCAGCCC CTCCCACCTC 1860
CCAGACACAG CCTGGAGCTG CAGCAGAGGG AACAGACCAG CTCAGCACAG CCGCTAGGCT 1920
ATTGTGGCAA ACCCGTGACA GTCCTCCAAA GGGCTGCTGG TCAGAGCGCC CAAGGCACAA 1980
GCAAATACCC CCCTTGGGGT GCCCCACAAA CTCTCACTGA GCAGCAAGGC AGGCCCAGGC 2040
CACTACAGGC TCCCCCTCTC AGCAAACAGA ATAAACAGAG AAGAGACCAA GGTTTGCTCC 2100
CAACACAGGC ACTGGCCTCC TCATTCCCTT GTAATTGCCA ACCAAGGCCA CCATTTTCCA 2160
ATGAAGCTGG TCCACTCCAC CCCACCGATT GCCCAGAGGC CTGCTGTTAC CATCAGGAAG 2220
CCTGCCACAG CTGCAGACCT CAGTGGCGTC TGCAGAAAGC ACATTTAGAC TCCTGTGAGA 2280
ATCGCTCTGG GAAAGAGACT GGCGGGCAGG CACCCACAGC CCCAGACACA CACCCAAAAT 2340
TTACCACAGG GCAATGCCGG GCAAGTCGGC ACACCTACAC AGGCAGGGCA GGGAAGGACG 2400
TTAGACTGAA CCATGTCTCC AGAAATTAGG TCCATCCATC AAAAGACCCT ACAGTGTCTC 2460
GGCCGGCTGG CGGCTCAGAG AGCCATGTGT CACCTCTCTC CAACAACAAA AGAAATCCCC 2520
CTCTCCTGGA GGTCGCAGTA GATAATCTGA GATTTTTGAC 2560