EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-07425

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr2:157288810-157290360

Target genes

Number: 5
Name	Ensembl ID

Manbal	ENSMUSG00000063019
Src	ENSMUSG00000027646
Nnat	ENSMUSG00000067786
Blcap	ENSMUSG00000067787
Ctnnbl1	ENSMUSG00000027649

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RFX3	MA0798.1	chr2:157289213-157289229	CATCACCATGGCAACC	+	6.06
RFX4	MA0799.1	chr2:157289213-157289229	CATCACCATGGCAACC	+	6.02
RREB1	MA0073.1	chr2:157289362-157289382	GGTGTGTGTGTGGTGTGGTG	-	6.11
RREB1	MA0073.1	chr2:157289388-157289408	TGGGTGTGTGTGTGTGGTGT	-	6.11
RREB1	MA0073.1	chr2:157289392-157289412	TGTGTGTGTGTGGTGTGGTG	-	6.11
RREB1	MA0073.1	chr2:157289370-157289390	TGTGGTGTGGTGTGTGGGTG	-	6

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_04405	chr2:157287784-157291976	E14.5_Brain
mSE_05719	chr2:157287924-157291833	E14.5_Limb

Enhancer Sequence

CACAAAAGGT ATGCCTGAGT GAGCGGTGGC TGGCAGAGTT CAGCTTTGAG GGTATTACTT 60
GAGCTGGGTA TTGGAGAGTG AATAGGAGTT TGGTACATGA GATGGGGAGG GGAGAGCCTT 120
GCAGTGGAGG AGGTAACAGG AATTAAAGTT AAAGTGGCAC TTGAGGAAGA CTGAATGATC 180
CAGAGGTGGA CAGGACACGC AAGCTAAGGC TTCCTCTGGC CTCAGTTTCT CACATGGAGA 240
GTGGGTACAG TTTACCAGGA GTGTGACACA GCTGTGGATA TGTTTTACAG ATGGGAACAG 300
GAGCCGTATG CCCCTCTGTT TCCCTTTTCC CTTTCCCAGG GGCCTTTTCT GGCCTTACCC 360
TTCCCCCACA CTGTCTCTGC TGTTTCTGCC CTTTCTCTTA GTCCATCACC ATGGCAACCA 420
AGCCAGGCTG CTTCCTGTGG GCCTGGGGCT CAGCGGGAGA TGGAAAAGTG CACATACACA 480
CACACACACA CACACACACA CACACACACA CACCCGTGTG CTGTGCACAG TACACAGGGA 540
TGATGGGTGT GTGGTGTGTG TGTGGTGTGG TGTGTGGGTG GGTGTGTGTG TGTGGTGTGG 600
TGTGCTCGCT CACTGTTGGG GTTGGGCAGT GTTGCTGGAG TGAAATGTGG CGAGGTCCCG 660
GTTCCTGGGG CTTGGGGGTA TGGGCAAATG TGAGAATGTG GGCTCTGGGC ATAGGTATGC 720
CGTCAGCGGA GCCTTCTGTG TGCACATGAA GTGGGCAGTC AGTCTGTAGA AAACATGACT 780
TCCCAAGGGT TGCCTTGAGA CAGGTTAGGG TGGGTCCCAG GCCTAGTTCT CCCTGACTCA 840
CTTATGTTAC CAGAAGATCA CATTTACCTA ATGACGTCCA GTGGGGCTCC AGGGGCCTCA 900
TCAGTGAGTG GTGGACAGTC CGTCAGTCCT TCCACTCAGA ACTGCCAGCT ACATGGCAGG 960
CCGCTGGACC CTGCACCCCG CCTGCCTCTC CCCAGGCTAT CCAGGCTATC CAGGCTATCC 1020
AGGCTTTAGT TAACAAAGGT TTCTGTTGAG GACATTCTTA GCTGCAGGTT TTCTAGGCTC 1080
CAGAGAGGCA GCGCAGGGGC AAGGGCTGCA GGCCACACTC AGGATGTACC TCCTGCCCTG 1140
GACTAATTAC TCACAGGTCC ACACAGCCAG CCGCTACTCC TGTCTGCTCA GCTGGTGTCC 1200
AGTAGGCAGA ACAGGGCAGG CAGGCACGGG GTGGGTATAC CTGGAGAGGG CCAGCATTTA 1260
TGGAGTGCTT GCTGAGTACC GTGTGACTCT TCACGGTTGT CTCATTGTGT AGGGAGGAAA 1320
CAGGGCAAGC AGCAACTTGT CAGGGTCACA CAGTTGTGAG CACCTTGGGG TTCAGGTGTC 1380
TTACCAGGGC TGTGAGGCAC AGGGGCATGT CTGCCATTGG GGTTTTGTGC CTACACGGCT 1440
GCCCTGCTCC TCTCAGCACA CTAGGGGCTG AAAGAGAGTG GGACTAAGTC ACTTCCTCAA 1500
GCAAGGAACA CACTAGCAGG GTACCTCTGG GGTCTCCTCC CTGCCTACCC 1550