EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-07376

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr2:154873470-154876360

Target genes

Number: 6
Name	Ensembl ID

Eif2s2	ENSMUSG00000074656
Gm14226	ENSMUSG00000084897
Ahcy	ENSMUSG00000027597
Itch	ENSMUSG00000027598
Map1lc3a	ENSMUSG00000027602
Pigu	ENSMUSG00000038383

TF binding sites/motifs

Number: 8

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GCM1	MA0646.1	chr2:154874039-154874050	GTACCCGCATG	-	6.62
HNF1A	MA0046.2	chr2:154874803-154874818	AATTAATAATTAATA	+	6.17
JUND(var.2)	MA0492.1	chr2:154875987-154876002	GACGATGAGGTCATA	+	6.08
ONECUT3	MA0757.1	chr2:154875455-154875469	AGTAAATCAATAAA	+	6.09
POU4F1	MA0790.1	chr2:154874804-154874818	ATTAATAATTAATA	+	6.15
POU4F3	MA0791.1	chr2:154874801-154874817	ATAATTAATAATTAAT	-	6.14
POU4F3	MA0791.1	chr2:154874804-154874820	ATTAATAATTAATAAT	+	6.2
RUNX1	MA0002.2	chr2:154874328-154874339	AAACCACAAAC	-	6.02

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_08348

chr2:154875791-154878599

Liver

Enhancer Sequence

TCCAAGGTAA GCCTGGGAGT TCTTTTTTTT TTTCCCCCTG GGAGTTCTTA ACTGGGGGTG 60
GGAGACCTGC AAGTCTTGGC TGAGAACTAA ATGAAAAATA CTTCCTGGCC TCCAGGAAAC 120
AAAAGAACTG AAAACTACCT GAAGGTTTCC CCCGGCCTAG AGTCTTAAGG CTTCTATAGA 180
AGCCAGAGAG CCTAAATTCA TTGAGCAGAA CAGCTGCCTG CAGAAAAACA GTTCCCAATG 240
CTGATTAAGC ATTCCTGAAA TTGGTCACTC AGTTCTTTTG GATATTTACC TAAACCCCAC 300
TGCTGAAGAG CCACTCTTGC TGTATCTGAA CTTCTTTTAT TCCCTCCTCC TTTGAAATTC 360
TGGGAACCAA GTTCCAGGGC TTTGTGCTAA GACTACAAAC CTTCCATCCT CCTTGTCCAG 420
AGCCCCGGAG TGCTGAGAAT ACAGGTCCAT GCCACCGTGC CCAGCTGTTT CATCTGCTTA 480
AAAATCAGAA AGCAGGGTGG GGTCTGGAGA GATGGCTCAG CAGTGCAGAG CACTGGCTGC 540
TCTTGCAGAG GACCTGGGTT CAATTGGCAG TACCCGCATG GCAGCTCACA ACTGTCTGTA 600
ACTCCTGTTG CAGGGGATCT GACACCCTCA CACAGACATA CATGCAATTC AAATCACCAA 660
TGCACATCAA ATAAAAATAA AATTATAAAA ATAAAAAGGT GTAAAGAATA GAAAATAGAA 720
GTTAGGGGTG TGGTGATGCA TACCTTTAGT TTCAGAACTC AGGAGGCTGA GGCACGTAGA 780
TCTCTGAGTT TGAGGCCAGC CTGGTCTACA GAGTGAGTTC CAGGACAGCC AGGGCTACAC 840
AGAGAAACTC TGTCTCAAAA ACCACAAACC AAACCAAACA AAAAACATTT TAAAATGAAA 900
CTACAAGTGG GGTACAGTGG CACGCAGTTG TATTCCCAAT ACTTGGGAAG TAGAAGCACA 960
AAGATCAGGA GTTCATGGCT ATCCTAAACT ACCTAGCAAG TTCTGAAAGA GCCTGGGCTG 1020
CACAGCCACT GAAAAACAGA AGTATGATAG AAAACAACAT CATTTGCTGT AGCTAGATTA 1080
AGAGACTCAA CAAAAATAAA ATACTGTTAG CTGAGCATGG CAGCACTGGC TTGCAATCCC 1140
AGGGGCTTAG GAGGTTGAGG CAGGGGGATC CCTAGTTCAA GGGCTGCTGG AGCTTTGCAG 1200
CAAATTCAAC GACCACCTAA GCAAATTGAG ATGCTCTCAC AAAATGAATA TTGTTAAATG 1260
AGGGGATATA GTGGGGTACT AAAGCTTGCC TGTAACACAC AAAGCCCTGG GTTCAATTCC 1320
CACTATGGCA AATAATTAAT AATTAATAAT AAATACCATG TTAAAGTCAG CTGGATGTTA 1380
ATATGTGCTA GAGGCTCCTT AACCCTTTAA TACAGTTCCT TATGTTGTGG TGACTCCAAC 1440
CTTAAAATTA TTTTAATTAC TACTTCATAA CTGTGATTTT GTTACTGTTA TGAATTATAA 1500
TGCAAATATC TGTGTTTTCC GGTGGTCTTA GGCAACCCCT GTGAAAGGGT TATTAGGACC 1560
CCGTAGGGGT TCTTGACCCA CAAGTTGAAA CAGGCTACTA AAACACACTT TGTTAAAAGG 1620
CAGTTAGAAT GCCTTGAAAA AAGCAATTAA GGACATGCTA GGACCAAACA GAGCCTTCCA 1680
AACCGAAACA GACAGAAAAA AGAATGCTTT CTCGCTGACT GAGGACCATT TCATGTTTTT 1740
GTACCTATAC CTAAAATCAT ACTACGATAA TACAGGTTCC TACACTCTGA TAAATAGCAG 1800
ATTGAGGCAT TGTTGAAATG CACATACTAT TCCTGTGTAG TGTGGCTCAA TTAATTGGAT 1860
CAACTATAAC CAAAGCAGGG AGCACTGAAC AAAATACATA TACATGCTAG GTGCTGGCAA 1920
TACAGCAGTA AACAAGAGAT TATAGCTGTG TGGAGCTTAC GTCTGAGTGG GGAAACCAGC 1980
CTTCAAGTAA ATCAATAAAG AAATCTAAAG TCTTATATGA TACATACTGT AAAGGAATTA 2040
AAGCATGGGG AAAGCCTAGA GAAGTAGCAT TAAACAAAAA AAATTAGTAA TCTAGAGCAA 2100
TGTCCAGTAG AAACACAGTA TAAGCCATAA ATGTATAATT TTGTATTTTC TAATAGCTGC 2160
CTTAAAAGAC TAACAATATT TAAAACTCGG TATAAAGTAT TACTATTTCA ACATCTAAAA 2220
ATTTTTTTAA AGTTACTTTT GTGCAGTCTT TAAAATCTGG TAAATAGCTG TCACTGCACA 2280
CATCAATTCC AACGCTAAAT GTGGACCTAG TATTTATGTT TAACAGGAAA ATATATGTTT 2340
ACGTTACACT TAAATAGAAA ACTCGGTTCC TCAGCACACA GGACCTGACT ACCAGTGCTA 2400
GAATGTCTCT AGGCTATGGG GTAGCTAGCC CAAAGGACAG ATGCCAAACA CAGGAGTCCT 2460
CCAGGGCCAA AAGGAAGTTT GTTTCTCCCT AGAGAAATCA CTGGGAGCCC TTAAGCGGAC 2520
GATGAGGTCA TAGGAAGGGC CTTCTTTGGC CACTGGAGGA TGTTAACTCT AGAGGACAGG 2580
GTGGCTAAGG GAAAGAAGAC AGTGAGTGGC CTAACCCAGG GGCAATGGAT AACACGGATG 2640
GTGACAGGCT TCAAACCGGA AGGTTGTTTA AAATTGGGGC TAAGTGGGGC CTAAGAAAAG 2700
GGCCAGGTCA GAGCTAGGTA AGCTTGAAGA TGAAGGCGAT GTGCAGGTTG GGGTGGAGGG 2760
CAAGGACCCA CTGGGATGCC CTGTGTGCAT GAAAAAAAAG GGGGGCAGAG GTCTCTGGTC 2820
CTGGACCTCC ACAGTACATG AGCATCGCAG GATGGCGTAG CCCGTTCAGT AGTCCTCAAC 2880
GTCTCTCCTA 2890