EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-07018

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr2:90744050-90744570

Target genes

Number: 10
Name	Ensembl ID

Nup160	ENSMUSG00000051329
Fnbp4	ENSMUSG00000008200
Mtch2	ENSMUSG00000027282
Kbtbd4	ENSMUSG00000005505
Ndufs3	ENSMUSG00000005510
Gm17661	ENSMUSG00000091037
Celf1	ENSMUSG00000005506
Rapsn	ENSMUSG00000002104
Psmc3	ENSMUSG00000002102
Mybpc3	ENSMUSG00000002100

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

PHOX2A	MA0713.1	chr2:90744150-90744161	TAATTTAATTA	+	6.62
PROP1	MA0715.1	chr2:90744150-90744161	TAATTTAATTA	-	6.32
PROP1	MA0715.1	chr2:90744150-90744161	TAATTTAATTA	+	6.62
Phox2b	MA0681.1	chr2:90744150-90744161	TAATTTAATTA	+	6.62

Enhancer Sequence

TTCAAGTACT TGAGCACCCA CACATCACAG AATCAAGGAT TAAGTATTTT CTGCACTTGG 60
AAACAGACCT GCTTTGTCGT TCACTGGAAC TGTGACTGAA TAATTTAATT ATCTGGACCG 120
CTTCATGATC TACATCTATA TGGACAGTAA AACGTTATGC GTCTCATCAG GCTCTTATGA 180
AGTCCAAGGT GCCTAGTAAA TACTAAATTG ATGTGAGCTA CAATTATTTT GGACTTTGAG 240
TCTCAAAAGT TTTTGTTACC TGCGCTCAAA GACAATTTCA TCGGAGGACA AAAAAAAAAA 300
TCAAATCCTG ATAACGAGCA AAAGGCGATC AAGATCAGAA GGGAACAAAT ATCTAGGGCA 360
CAGGAAGTGC TCGATTCTAA CAGCAAAGTG GAGACCATAG CAATCTCCAA GGACAAGCAG 420
AGATTTGCCA GGAGGGAAGG ACATTCCAAG GCAAGGACAA ACATCTGACA GAAACAACGA 480
AAGGCCCCAG CTAACGTTGG GGGAAAAAGC GCCATCCGCA 520