EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-06950

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr2:74549310-74550040

Target genes

Number: 8
Name	Ensembl ID

Mrpl23	ENSMUSG00000075279
Evx2	ENSMUSG00000001815
Hoxd13	ENSMUSG00000001819
Hoxd12	ENSMUSG00000001823
Hoxd11	ENSMUSG00000042499
Hoxd10	ENSMUSG00000050368
Hoxd1	ENSMUSG00000042448
Mtx2	ENSMUSG00000027099

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

BCL6B	MA0731.1	chr2:74549442-74549459	GTAATTCCTAGAAAAGG	-	6
RARA(var.2)	MA0730.1	chr2:74549877-74549894	AGACCTTTTTATGACCT	-	6.43
Rarb(var.2)	MA0858.1	chr2:74549877-74549894	AGACCTTTTTATGACCT	-	6.5
ZNF263	MA0528.1	chr2:74549585-74549606	AGAGGAGAGAGAGAGAGAGAG	+	6.22
ZNF263	MA0528.1	chr2:74549747-74549768	AGAGGAGAGAGAGGAGAGAGA	+	6.78

Enhancer Sequence

GGCAGACTTG GGACTGGGGG AGGCGCTGTG GGATGACATC CCCGGAGCTT AAGCACTGCC 60
TGGTCTCATT TCCCTCCCAC ATGGCGGCCA ATTGCACAGA CGTTTTGAGC CAAACAAAAC 120
CAAAAATGCC CAGTAATTCC TAGAAAAGGT GTGGTGCGTG CGCGCGTGCG TGTGTGTGTG 180
TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGAAAGAG GGGGGGGGAG GCACAGAGAC 240
AGACAGAGAC AGAACGAGAG AGAACTGACA CACAGAGAGG AGAGAGAGAG AGAGAGAGAG 300
AGAGAGAGAG AGAGAGAGAG AGAGAGAAGA GAGGAAAGGG ATTCCGAAGA GAAAGGAAAA 360
GAAAAGAAGA TAAAAAGAGG AGAGGTAGTA AGGAGAGAGA GAGAGAGAGA GAGAGAGAGA 420
GAGAGAGAGA GAGAGAGAGA GGAGAGAGAG GAGAGAGAGA GAGAAAGAGA AGAGGAAAAA 480
CATGGCGCTC GCGAGCTGTA TGTGCAAAAT CCGCAAGGAA TTGCAGTAAA TTCCTTTTTG 540
TTTGAAGAAA ATTTACAACT TGGTAATAGA CCTTTTTATG ACCTATTTGC GGTCGTCATT 600
GGCTGCGGCT GGTCATGTGC AGGCGCCGCT CGCCTTCACG GCCTTTTTCC TGATTTCCCA 660
GGCGAATTTG CCCCCGCATT CTGCTTTCCC AGAGCCTCAC CCCCTCTTTT TCTAACCTTT 720
GTCTCTGCAG 730