EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-06945

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr2:74521220-74521950

Target genes

Number: 8
Name	Ensembl ID

Mrpl23	ENSMUSG00000075279
Evx2	ENSMUSG00000001815
Hoxd13	ENSMUSG00000001819
Hoxd12	ENSMUSG00000001823
Hoxd11	ENSMUSG00000042499
Hoxd10	ENSMUSG00000050368
Hoxd9	ENSMUSG00000043342
Hoxd8	ENSMUSG00000027102

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr2:74521461-74521481	TGGGTGGGGGGGGGGTGGGT	-	6.06
RREB1	MA0073.1	chr2:74521470-74521490	GGGGGGTGGGTGAGTTGAGG	-	6.6
ZNF740	MA0753.2	chr2:74521464-74521477	GTGGGGGGGGGGT	-	6.32
ZNF740	MA0753.2	chr2:74521466-74521479	GGGGGGGGGGTGG	-	6.44

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_05519

chr2:74509667-74523684

E14.5_Limb

Enhancer Sequence

ACAGGTAGGC GCGGGGCGCG GGCCGAGGGG CTGGCCCGGG GCGGCGGAGG GGGGGCGGTG 60
GGGACCTCCC TCTGCTTGCG CCGTTTTATG TGCTACTTTA TAAGCATTCG AGGGGGTTTA 120
TACATCCTAT AAGATTTCCC GGGTCGTTGT AAAGCGTGTT TATGATAGGA AACCAATTTA 180
GGTGGGCTTA AGGTAGACTT CGAAGAGGAC ATTAATCGCC GTAGAGAGCT TTCCCTCTAT 240
TTGGGTGGGG GGGGGGTGGG TGAGTTGAGG ACCTTAGAGG AGGGAAGTAC ATTTGCAGCC 300
AGTTGATGAG TGGGAACACG AGAGCCTCCT GCCTTTCAGG GAGAGGGTAA GTGATCTGCC 360
GCACTGGACT TAACCCCAAC CTCTGGCTGG CGCTCAGCTC GGAGTTGAGC AGATGCTCCT 420
GTGGGCGCGC TCTTGTCTCT CTCCCTTCAT GTTCCAGTTC AGAGCCTGCC TTGCCATCAT 480
CCTTTTTCCT ATCTCAGTGC CAGCCTAGAG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG 540
TGTGTCCGGG CGTGAACACA TGTCCACGCC CGCACTCTAC TGTGCCCGCC CATATATCAT 600
CCCCCACGAC GCAGGCAGGG CCTTTCAACG GCGGCAAGGG ACGTCCCTAA CTGGGCCAAG 660
GCCTGGCCCT AGCTCAGTGG CCAGAGTGGG TGGGGGCAAG CAGTAGCCTC TCTCACCTCT 720
TGGTTTCTTT 730