EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-06733

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr2:32479860-32480950

Target genes

Number: 25
Name	Ensembl ID

Golga2	ENSMUSG00000002546
Swi5	ENSMUSG00000044627
Ciz1	ENSMUSG00000039205
Dnm1	ENSMUSG00000026825
1110008P14Rik	ENSMUSG00000039195
Ptges2	ENSMUSG00000026820
Naif1	ENSMUSG00000039164
Slc25a25	ENSMUSG00000026819
Fam102a	ENSMUSG00000039157
Pip5kl1	ENSMUSG00000046854
9430097D07Rik	ENSMUSG00000075405
St6galnac4	ENSMUSG00000079442
St6galnac6	ENSMUSG00000026811
Ak1	ENSMUSG00000026817
Eng	ENSMUSG00000026814
Fpgs	ENSMUSG00000009566
Cdk9	ENSMUSG00000009555
Sh2d3c	ENSMUSG00000059013
Tor2a	ENSMUSG00000009563
Ttc16	ENSMUSG00000039021
Ptrh1	ENSMUSG00000053746
1700019L03Rik	ENSMUSG00000038987
Stxbp1	ENSMUSG00000026797
Fam129b	ENSMUSG00000026796
Rpl12	ENSMUSG00000038900

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr2:32480654-32480672	CCCTCCCTCCTTACTTCC	-	6.86
ZNF263	MA0528.1	chr2:32480899-32480920	TCCCTCCCTCCTCCCTTCTCT	-	6.17
ZNF263	MA0528.1	chr2:32480875-32480896	CTCTCTCCTCCTCCTTCCCCC	-	6.34
ZNF263	MA0528.1	chr2:32480874-32480895	TCTCTCTCCTCCTCCTTCCCC	-	6.99
ZNF263	MA0528.1	chr2:32480868-32480889	CTTTCTTCTCTCTCCTCCTCC	-	7.99
ZNF263	MA0528.1	chr2:32480871-32480892	TCTTCTCTCTCCTCCTCCTTC	-	8.49

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_05272	chr2:32480058-32484847	E14.5_Heart
mSE_08062	chr2:32480710-32482450	Kidney

Enhancer Sequence

CCATGCACCC TTCTGTGCTA TGGCCCCAGT CAGTCCCCGC CACTGGGCTT AAGAACCTTC 60
CTGTGTAAAT CCTGTTCCTG AATGGGTTTC TGATGTAGGA GCTGATAAAA TCAATCTGCT 120
TTCCCCGAAA GTTGTGCAAT GCACACACCA GCCTAAGTAT TGGGAGTAGC CTTTCAGGCC 180
AGCACAGGAC AGATGGCCCA GTCCATCTGC CCCCACAGTG GCAGGACCTT GGTATGCAGG 240
CTGCTACTGG TGTTCAGGCA CCACCCAAAC TGGTTGTCTG TGGCTCCCAA GCATTTACAA 300
AAGTTTCCAG TTTCACCCTA TTTTGCTGTT CGGAGCCATG CTTTGGAGGC CTTATGTGAG 360
CCGATCCCTC TGTCCTGCTA TGCTTTGAGC ACCAGCACCC TGTACCACTT CTCCTGTAGA 420
GAGCTCCCTA ATTAGGCACA TGGCTTTCCA CACGGGGAGT CTCAGGTGGC CTCTGGGTCC 480
TGCTCTGTGC TTAGGGGTTC CCTGGGCACA GCTGGAGTCT GCTGTTGGCA TCATCGTGCT 540
CCACCGGGTA CTCAGAAATG AGAGTCCTCA TTCTTAGCAA ACCCCAATCT GGATACACAA 600
AGCTTTCTGA GTGTTCTTTC TCCATGTTCA ACCATGGAGA GTTCAAGGCT GGCTTATCAT 660
CTACCTAGCC ACCAGATAGT CAGGATCCAG GAGGAGCTCA AAGAGTCATT TCCAATAGGG 720
GAGATGTCTC AGGGTAGGGG GTCTCAGAGC CTGAGGATGG TGACCCTGGA ACAACAAAGT 780
TTACACCCTG GTCCCCCTCC CTCCTTACTT CCCTGGTCTG GTCTCCTTGA TTAAACGCTG 840
AGATTAAACA CACCAACTTG TCTGAGCATC AGCTGACCCA GCTAAAGAAC CCTTGTCTGT 900
GGAGAGTCGT GCGGGCATAG AGTGGTGGCA GACACACTGT GTGCAGGTTT AGTCCCAGGG 960
AGTGCCTGGT GGGGACGCTC ACTCCTAAGC TTTCCATGAG AGTTCCTGCT TTCTTCTCTC 1020
TCCTCCTCCT TCCCCCGGCT CCCTCCCTCC TCCCTTCTCT CTGCCATCTC GCCAGAGTGC 1080
TGGCTCCCAG 1090