EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-06726

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr2:32263810-32265360

Target genes

Number: 22
Name	Ensembl ID

Prrc2b	ENSMUSG00000039262
Pomt1	ENSMUSG00000039254
Uck1	ENSMUSG00000002550
Gm13611	ENSMUSG00000066068
Golga2	ENSMUSG00000002546
Swi5	ENSMUSG00000044627
Ciz1	ENSMUSG00000039205
1110008P14Rik	ENSMUSG00000039195
Ptges2	ENSMUSG00000026820
Naif1	ENSMUSG00000039164
Slc25a25	ENSMUSG00000026819
Fam102a	ENSMUSG00000039157
Dpm2	ENSMUSG00000026810
Pip5kl1	ENSMUSG00000046854
9430097D07Rik	ENSMUSG00000075405
St6galnac4	ENSMUSG00000079442
St6galnac6	ENSMUSG00000026811
Ak1	ENSMUSG00000026817
Eng	ENSMUSG00000026814
Fpgs	ENSMUSG00000009566
Cdk9	ENSMUSG00000009555
Sh2d3c	ENSMUSG00000059013

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NFYB	MA0502.1	chr2:32264761-32264776	GCCTCGGCCAATCAG	+	6.26
Nr2f6	MA0677.1	chr2:32265156-32265170	TGTCCTTTGACCTC	-	6.14
RXRB	MA0855.1	chr2:32265156-32265170	TGTCCTTTGACCTC	-	6.2
Rxra	MA0512.2	chr2:32265156-32265170	TGTCCTTTGACCTC	-	6.19

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_08242	chr2:32263796-32265293	Kidney
mSE_08445	chr2:32263793-32265478	Liver

Enhancer Sequence

GAGAGAAAGA GAGAAAGAGA GAAAGAAAGA AAGAAAGAAA GAAAGAAAGA AAGAAAGAAA 60
GAAAGAAAGA AAGAAAGAAA GAGGCAATAT CTCATTTCAC TGGGATGCTC TCCTGTCTGG 120
TCCTGTGCTT GGGGACTCTG TCCAGCAGGC CCAGGCTGAT GGCCCCCACA GAAGGACCGA 180
GGAGGCCAGC AGCGCAGCCT CAGGTTTACT TCTGCACTGC CATCAGCAGC TCTCATCCAG 240
CCCAGACCAA CTGTGGCCAC GCTGGGCTGG CTGGCCCTTG GGTGCAAGGA CCAAGGTCCA 300
CCTGGGCAGT TAGGTCCACC AAGAAGGTCC CTCCCCTTCT ACCTTTTCCC TACATTCCAA 360
TCCACTCGGA CCAGTGCGAT CTGGATCGGG GACAGCAGGG CACAGGCCAC CACTCTCCCC 420
TCTGTGTGAA CTGAGACATG GCCTTCCCTT TCCGGACTGT AAGAAAGGTT CCCATGGGGA 480
AACTGAGGTT GGGCAATGCA GAAGCCTTGC CCGAGATCAT ACCATGATGC CCTAAAATAC 540
CTTGTAACCC GATCCAAAGG CTACGCAGGG CTAATATAAT CCAAACCACA TGTGCATGTT 600
AACAGTTCTG GGCTCCAGGC ATGTGCAGCG ACAGGGAACA AAGCCCTCGG CGCCGAATGG 660
ATGGATAAGA AAGAGCCCGA GGAATGAGAA CAGTTAGCTG ACACCAGGCA GCAGGGCGGG 720
GAGAAGAGGC CAGCTTAGGT GGGGAACAGC CTAGTTCTGA GTAAGGCCGG CAGTGGAGGT 780
CTCACGACCC TAAAACACAG GGCCCGGGGA CAGAGACTGC CGATATCCCT GGCCGGTGAA 840
CCTTGTACTG TACCCACCTG ACAGTGCCCG ACAAGCCAGT TCAATTGCTG GTAAGGCCTC 900
TCCTTCCAGC CGACATGGAG GACTTGAATG AGTGGCAGAG CAGGCTTGAG GGCCTCGGCC 960
AATCAGTCAG GACCCAAAGG TAAGGAAAGT CGTCATGTGT TGCCTTGGTG ACAAATTCCT 1020
GAAGTAAATG CTATATTTGA TGTCCTAGCT AGTTCCCAGA ACCTTGCTTG GCAAACATCA 1080
CAGACATTAA TTCTCACACA GCTGTAGGTG TGGGTAGGGC CAGCTCCCTG TCTCCAGTGG 1140
TGGCTGCTAG CAGGACCCAG TTTCTTAGCT TTCAGACACA GCCCCCTAAT CTCTGCCTCT 1200
TCACGTTGGA TCCCCATTCC TCCCACTTGT TAGAGTGTTG GGACCACTGA GATGACTTAG 1260
CAGGTAAAGG TGGTTGCCGT TAATCCTGAA GACCTAAGTT TAATCCCCAG GACACTCATA 1320
AAAGGACAGA ACAGGCTTCC ACAAGTTGTC CTTTGACCTC CACACATGCA CCTAAATACA 1380
CACACACACA CACACACACA CACACACACA CACACACACA CATCCACACA CATATGCACA 1440
TGCACATACA CACACACAAA TAAATAAAAA TAAATACATA ATAACATTTA AAGCAGGATA 1500
CCATATGTAC CCTGCCACTT TTAATTCTTT TTTTAAAAAG ATTTTATTTA 1550