EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-06294

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr19:10599810-10600440

Target genes

Number: 12
Name	Ensembl ID

Fads1	ENSMUSG00000010663
Lrrc10b	ENSMUSG00000090291
Sdhaf2	ENSMUSG00000024668
Cpsf7	ENSMUSG00000034820
Tmem216	ENSMUSG00000024667
Tmem138	ENSMUSG00000024666
Cybasc3	ENSMUSG00000034445
Dak	ENSMUSG00000034371
Ddb1	ENSMUSG00000024740
Vps37c	ENSMUSG00000048832
Tmem132a	ENSMUSG00000024736
Prpf19	ENSMUSG00000024735

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr19:10600297-10600308	GGGGGCGGGGC	-	6.02
KLF5	MA0599.1	chr19:10600298-10600308	GGGGCGGGGC	-	6.02
NR2C2	MA0504.1	chr19:10600370-10600385	TGACCCTTGCCCTCC	-	6.2
RREB1	MA0073.1	chr19:10599882-10599902	GGGAGGGGGTCGGTTGGGGT	-	6.14
RREB1	MA0073.1	chr19:10599881-10599901	AGGGAGGGGGTCGGTTGGGG	-	6.4
TCF4	MA0830.1	chr19:10600085-10600095	AGCAGGTGCG	-	6.02

Enhancer Sequence

ATTCCCGGTA ACGGGGGCGC GCGGCCCGGG GCCGGCGGGG CCGGAAGGAG GGCGGGGGCC 60
GGCGCCGCGG AAGGGAGGGG GTCGGTTGGG GTGGCGGCGG CGGAAGACAG CGGGTGGAGG 120
GAAGCGCGGG CCTCTGAGGG AGGGGCTGAG GTCCTGGAGC TGTGGGAGGG AGCAGGGCAG 180
GCCTAGCCTA GGGCGAGGAC AGGGCCCCGT TGGTGTGGAG GCGGCGGGAG CTTCCGGGCC 240
CGCGGGGGCT CCGGCTTGGG ACGCCCCCTG GGCCTAGCAG GTGCGACGGG CTGAGCTTGC 300
GGCGTTCGCC GCGGTGGTTC ACAGCGCGGC CTGAGGGCCC TCTCAGGAGT CGAGGCCCGG 360
ACTTGGCGGT GGCGCCATAG GCAACTACGG GCGCCGACTC GGAGCACCTC GGGTCGGGCC 420
CGCGGGTGAT GGGCAGCGAG CTCCGCGAGC CCGAGCGGCC TGGGAGAGCT GGGGGCGGCG 480
CGAGGCTGGG GGCGGGGCAG AGCGGGTGGG GCCAGGCTCC CGGCCGCCGG GATGCTGCGT 540
CTTGGGAGAC TAGAGCTTGT TGACCCTTGC CCTCCTCCCA GCCTGGGACC CTTGTGCCTT 600
AAAATTTTTT ACCCTTTTCT GAATACCGTA 630