EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-06155

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr19:5490600-5491870

Target genes

Number: 27
Name	Ensembl ID

Cnih2	ENSMUSG00000024873
Pacs1	ENSMUSG00000024855
Sf3b2	ENSMUSG00000024853
Gal3st3	ENSMUSG00000047658
Cst6	ENSMUSG00000024846
Banf1	ENSMUSG00000024844
Eif1ad	ENSMUSG00000024841
Sart1	ENSMUSG00000039148
Gm6293	ENSMUSG00000051133
Drap1	ENSMUSG00000024914
AI837181	ENSMUSG00000047423
Fosl1	ENSMUSG00000024912
Fibp	ENSMUSG00000024911
Ctsw	ENSMUSG00000024910
Efemp2	ENSMUSG00000024909
Mus81	ENSMUSG00000024906
Cfl1	ENSMUSG00000056201
Snx32	ENSMUSG00000056185
Rnaseh2c	ENSMUSG00000024925
Kat5	ENSMUSG00000024926
Rela	ENSMUSG00000024927
Sipa1	ENSMUSG00000056917
Pcnxl3	ENSMUSG00000054874
Fam89b	ENSMUSG00000024939
Sssca1	ENSMUSG00000079478
Ltbp3	ENSMUSG00000024940
Scyl1	ENSMUSG00000024941

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZNF263

MA0528.1

chr19:5491015-5491036

CCCTTCCCCGCATCATCCTCC

6.07

dbSUPER

Number of super-enhancer constituents: 8
ID	Coordinate	Tissue/cell

mSE_04207	chr19:5487323-5491908	Cortex
mSE_05028	chr19:5487206-5491902	E14.5_Heart
mSE_06467	chr19:5487113-5491999	E14.5_Liver
mSE_07456	chr19:5487409-5492247	Intestine
mSE_09836	chr19:5486286-5492039	MEF
mSE_11558	chr19:5487307-5492312	Placenta
mSE_12228	chr19:5487421-5491880	Spleen
mSE_12648	chr19:5487407-5492060	Testis

Enhancer Sequence

TGGTGAGCAT TAGGCCACTG CGCCCGAGGG AAGTGGGTTC GTGATCCGTC GCTTGCGCGC 60
CGGGCGGGGT GGGGGCGGCA GAGAAGCGGT CTTGGTATCC CATCCCCCAG CACCCCGAGC 120
GAGATTAAGG GTCTCATTGA AGGGCAGGCC GCGCGTGCGC GCCTCCGGGC GCTGGGAAGG 180
GCCGATTCGG ACGTCGCTCG CGCGCCCCCT GGCTCCTCTC CCCTCCCCCA TCCTGCCTTT 240
GCGCCAGCGC GGCCACTGGC CGTGGGGGAG GGGTCCAGTG TGCGGGGCCT CGGGCAACGC 300
TCGCTGGTTC TCGATGGCGC GCGCTGGACC AGAGCACGCG GCATCCAAAC CCTGGCCCGG 360
GGCCGCTAGG GAAAAGCGCG CGAGGTGTCG GCGCGCGCCC CACCCAAGGG CTGTTCCCTT 420
CCCCGCATCA TCCTCCCTCT GCGGCTAGGT TGGTCTCCAC AGCAGGTGGC AGGGATTCCG 480
CCGTCAGGGC GGGGCGGGGG CGGCCGCGGT GTGGCTCTGG GAGATGCTGA GGCATCGGGG 540
AACCTGATTG AGACGCTGGT TCTGGAGCCT TCTTGCAACA CGAGTCACGG AGTGGGTTCC 600
TGTACAGGCT ATCGCCCCAC TTCTAGAAAG AGCGATTACA CACTCCATTC TGTAGTCACT 660
GTACCTCGGG CTAGAGCTAG AACAGCGCGT GCGCACATGC TTGGGCCCTG CCATCCCGGC 720
TGCAGCTCTA GCCGAGCTAG GCCTTTTGCT GCTCTGCCGG ATGGGGCCGA GGGTGGAGCC 780
GCGTTTAGGG AAGTGACCGA GGCGGGTACC GCCCGGAAGC CACCAGCTTT TATGCTTAGC 840
CTGAGGGCAC GGGAAACTGT TTTTTGGAGT GAGACTGGCC AGAGCTACCT CTCCAGCTGA 900
CTGCGTTTAC GCCTATTCCT AAAGGCGAGC CTTAGGCGTT GAGACATCTG AGGTCCGGCC 960
GCCTCGCTGC CTCTGGGCTA CGAGTGTCTC TTGGGGAGGC CCTGAACCTA GTCCAATCTT 1020
TCTCCGCCTA CTCCGGAAGC GGGTGAATCA CGTGGCTAGC TTCCTCTGCA GTTCCATGGT 1080
GGTGGTGGGG AGGGTTGGTT GTAGATTTCT GATTGGGTCG TCCCCCAGGG CCGTACAAAG 1140
CAGAAAGTTT TCGGCGATTT GGGGCATCAC AGTTTGACCT ATTAATTTGT CAGTCTTTTT 1200
TTTTTTTTAA AGGACTCACC ATTCTTGGAT GACAGGGAGT TGTCCAGCAG GGCCTTAATT 1260
AAGGGTTGTA 1270