EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-06132

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr19:4810750-4811170

Target genes

Number: 16
Name	Ensembl ID

Pcx	ENSMUSG00000024892
Lrfn4	ENSMUSG00000045045
Spnb3	ENSMUSG00000067889
Rbm4b	ENSMUSG00000033760
Rbm14	ENSMUSG00000006456
Ccs	ENSMUSG00000034108
Ctsf	ENSMUSG00000083282
Actn3	ENSMUSG00000006457
Zdhhc24	ENSMUSG00000006463
Bbs1	ENSMUSG00000006464
Mrpl11	ENSMUSG00000024902
B3gnt1	ENSMUSG00000047379
Brms1	ENSMUSG00000080268
Rin1	ENSMUSG00000024883
Cd248	ENSMUSG00000056481
Cnih2	ENSMUSG00000024873

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SP1	MA0079.4	chr19:4811106-4811121	GAGGGGCGTGGCTAA	-	6.82
SP4	MA0685.1	chr19:4811104-4811121	GTGAGGGGCGTGGCTAA	-	6.53

Enhancer Sequence

CCTCGATCTG ACCAAATTCT GGAGAGGAAG TGGGGAAGTG GCGAACTCTT TTCACCGCTC 60
CATAATCCGG TTGGTGCCCT TCCCTTTCCA TTTCATTTTG GTGCCAGGCT CATGCAACCA 120
GGAAAAGGCG CCTCCTCCCA ACCCCGCACA CTCGCAAATC TCTGGCGCGT CCCCAGCCCC 180
GAGGCTTCGG CTTGCAGTGG CCACTGCACC CGCCCGGAAC CGACTCCTCC CACTTGATGA 240
ATGTTGCTGG GACCGCAGGG GAGAAGGGTG GCTCTACCCA ACTCGCCCCC AGCACCTTAG 300
GCCCCGCTCC TGCACACTTC CCCATCATTC CCAACCCTGA GGACCAACCC CAGAGTGAGG 360
GGCGTGGCTA AGAGGCAGAG AGCACCGCGC GTGTCCCCTC CCGAGCGCGC TCCCGCGTTA 420