EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-06129

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr19:4756660-4757240

Target genes

Number: 12
Name	Ensembl ID

Pcx	ENSMUSG00000024892
Lrfn4	ENSMUSG00000045045
Spnb3	ENSMUSG00000067889
Rbm4b	ENSMUSG00000033760
Rbm14	ENSMUSG00000006456
Ccs	ENSMUSG00000034108
Ctsf	ENSMUSG00000083282
Actn3	ENSMUSG00000006457
Zdhhc24	ENSMUSG00000006463
Bbs1	ENSMUSG00000006464
Peli3	ENSMUSG00000024901
Cnih2	ENSMUSG00000024873

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

E2F7	MA0758.1	chr19:4756959-4756973	ATTTCCCTCCAAAA	+	6.24
KLF16	MA0741.1	chr19:4756809-4756820	GGGGGCGGGGC	-	6.02
KLF5	MA0599.1	chr19:4756810-4756820	GGGGCGGGGC	-	6.02
SP2	MA0516.2	chr19:4756807-4756824	GAGGGGGCGGGGCAGGG	-	6

Enhancer Sequence

GGTAGGAGAG GATGCTGTGG GTGTGTGGGA AGCCCTGGAG CGGACTGGGC CGGACCTCGG 60
AGGGCCGGGA AGGCTCGGGT TTGGGGCCAC TCATCTTCTG AGGAAGGTCC CGGGAAGACA 120
AGGAAAGGAG GCGGGGCCGG GTCTCCGGAG GGGGCGGGGC AGGGGTCGGG CCGAGTCTTT 180
GTTGGGATGT TGCAGCGGAG GTTGGGCCGC TGAGGATAGG GGTCCAGTGT TGGGTGAAAG 240
AGGGCTTTCG TTCTTGGAGT ATGGTGGGAG GGGATACCGC GCTGTGGAGA GGTACACAGA 300
TTTCCCTCCA AAAACCCGTA ACTAGGGACA TTCAGATACT TCATGCCTTC CACTTGTCTT 360
TCATCCCTGT GCTAAACCGT GAAGGAGCTA ACCTTGTAGA GTCAATGTGC CTGACCTCAC 420
GGATATATAT CTTAGACCTT GTTGTGCATT CTGACCCCCG ACCTTCTGTT GGCATTGTCA 480
CACAGCAGTT CCTCTCTCAA AAAGAACTGT GAGGGTCGGG GTGTGCTGTA GTGTCAGTTT 540
CTCACTTCAC ACCTGACTTT TAAAATCTTG TTTCTTCTCT 580