EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-05338

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr17:34535790-34536440

Target genes

Number: 13
Name	Ensembl ID

H2	ENSMUSG00000024309
Slc39a7	ENSMUSG00000024327
Gm20493	ENSMUSG00000092246
Tap1	ENSMUSG00000037321
Notch4	ENSMUSG00000015468
Gpsm3	ENSMUSG00000034786
Pbx2	ENSMUSG00000034673
Ager	ENSMUSG00000015452
Rnf5	ENSMUSG00000015478
Egfl8	ENSMUSG00000015467
Ppt2	ENSMUSG00000015474
Fkbpl	ENSMUSG00000033739
Atf6b	ENSMUSG00000015461

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr17:34536296-34536308	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr17:34536300-34536312	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr17:34536304-34536316	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr17:34536308-34536320	AAACAAACAAAC	-	6.32
YY1	MA0095.2	chr17:34535987-34535999	CAAAATGGCGGC	+	6.92
ZNF263	MA0528.1	chr17:34536228-34536249	GATGCAGGGAAAGGGGGGGGG	+	6.1

Enhancer Sequence

AAGAGAAGGT TAGTCATGGT GTAGTCCTGC CACAGGCGGC GTGTCCAGCT CACTCCCCGC 60
CCCCGTACAG TCCCTGAGCA GCGCGGCAGC CCCACAAAAG CTGCCGCGCC ACAAAAGCGC 120
TCAAAGCGGC GGCAGGTTTG TCCTTGCCGC CGCAGGCCAC AGCCGACGCC ACGATGAAGC 180
GTCCCACAGG AGCTGTCCAA AATGGCGGCT CCTGTTAAAA CGGCCTCACC GCGGCCGCTC 240
AGCTTGCAGT GGCGGATCCC CTGTCCCGCC TCAGCCTACA GCCTTAGTGA AATACCGCCG 300
CTGGAACTGT CCACCATGGC AGCAGCGCCT CCTCTCCAGT CTCCCCTAGC CTCCCCACAG 360
AGATGGTGCC TCAGCAAACC CTGGCGAAGG CCGGCTGCAG TCAGGAAGGA CTTCCTACCC 420
TAACCCATGG GTCTGACTGA TGCAGGGAAA GGGGGGGGGG GAGGGGGGAT GAAAAAAAAA 480
AGCCACCAAT CCCTGAGCTT CCCACAAAAC AAACAAACAA ACAAACAAAC AAAAAACCAC 540
CAATCCCTAA GCAGGAAAAC CCACCAATTC CTGCGCTCTC CCAAGTTCAA GACTTAAAAT 600
CCCACCAATC CTCACTCTGG AAATCTCTGC CCCGAAAAAC ACTGCCCCCT 650