EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-04211

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr15:76024040-76024390

Target genes

Number: 7
Name	Ensembl ID

BC024139	ENSMUSG00000044361
Plec	ENSMUSG00000022565
Gm10345	ENSMUSG00000071724
Gpaa1	ENSMUSG00000022561
Scx	ENSMUSG00000034161
Bop1	ENSMUSG00000022557
Fbxl6	ENSMUSG00000022559

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr15:76024092-76024110	TGTGGGAAGGAAGGAAGG	+	6.56
EWSR1-FLI1	MA0149.1	chr15:76024096-76024114	GGAAGGAAGGAAGGGAGT	+	8.14
ZNF263	MA0528.1	chr15:76024097-76024118	GAAGGAAGGAAGGGAGTGGGG	+	6.02
ZNF263	MA0528.1	chr15:76024101-76024122	GAAGGAAGGGAGTGGGGGAGA	+	6.26

dbSUPER

Number of super-enhancer constituents: 5
ID	Coordinate	Tissue/cell

mSE_01328	chr15:76020484-76085239	Th_Cells
mSE_07192	chr15:76024189-76031007	Intestine
mSE_09091	chr15:76023734-76028234	Lung
mSE_09390	chr15:76021849-76039297	MEF
mSE_11379	chr15:76022744-76030952	Placenta

Enhancer Sequence

AGCTGGATGA CCACCAGCCC AGGGGCAGGC TCTGAAAGCC AGCAACCCTG CCTGTGGGAA 60
GGAAGGAAGG GAGTGGGGGA GAGACAATAG CCAGGAAGCC ACAGGCAGTG GGCAGTGGCC 120
CTGGGGGTTG GGGGTGGGGT CCTCAGTGGT ACCCACTGCA GCTTCTGGTG AGTCTCTGGC 180
CCAGCCCCAG GTAGGCAGCA TGAAGGACAG CAGGCAGCTG GACACACAGC CATCTGCCTG 240
CCCACAAGCC AGATGTGGGC CAGGCTGGAC TGGCCGCAAT CCCCAGGTGA GTTGGGTGGG 300
CTCCACGGTC TTGGGAAGCC CAGGTGCTGC CATGTCGGCA GGCACAACCA 350