EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-03004

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr13:23536860-23538770

Target genes

Number: 27
Name	Ensembl ID

Vmn1r	ENSMUSG00000084315
Gm11331	ENSMUSG00000082593
Gm11332	ENSMUSG00000084096
Zfp322a	ENSMUSG00000046351
Abt1	ENSMUSG00000036376
Btn2a2	ENSMUSG00000053216
Hist1h4h	ENSMUSG00000060981
Hist1h2af	ENSMUSG00000061991
Hist1h4f	ENSMUSG00000069274
Hist1h3e	ENSMUSG00000069273
Hist1h2ae	ENSMUSG00000069272
Hist1h2bg	ENSMUSG00000058385
Hist1h2bf	ENSMUSG00000069268
Hist1h2ad	ENSMUSG00000071478
Hist1h4d	ENSMUSG00000061482
Hist1h1e	ENSMUSG00000051627
Hist1h2bc	ENSMUSG00000018102
Hist1h4c	ENSMUSG00000060678
Hfe	ENSMUSG00000006611
Gm11336	ENSMUSG00000080999
Hist1h2bb	ENSMUSG00000075031
Hist1h2ab	ENSMUSG00000061615
Hist1h3b	ENSMUSG00000069267
Hist1h4b	ENSMUSG00000069266
Hist1h4a	ENSMUSG00000060093
Hist1h3a	ENSMUSG00000069265
Hist1h1a	ENSMUSG00000049539

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ONECUT3	MA0757.1	chr13:23536991-23537005	TTTATTGATTATTG	-	6.34
Stat4	MA0518.1	chr13:23538625-23538639	TTTCCAGGAAGTCA	+	6.13

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

mSE_00519	chr13:23523191-23542672	pro-B_Cells
mSE_05609	chr13:23537020-23538787	E14.5_Limb
mSE_06254	chr13:23537020-23538936	E14.5_Liver

Enhancer Sequence

CTTTCCATTA AGTTGCTTCT TCACAGGTAT ATTGTCACTG CGATAAGAAA AGTAGTTAAT 60
AATTCATAAG GTAAAATTAT ATTTCCTGGA GTTGTTTTAA AGGTTTAGAT TCAGGCTGTC 120
AATTTGTATT CTTTATTGAT TATTGTATTC TATTACTGAT TATAGCGAAC CTGGGTCCAT 180
TTAACCTGAT CATATTTCGG GTTAAAGCAA TTATTAAAAT TGTGTAAGAG CTGTTATTAT 240
CAGGCAAAGA TATTTGTGAT TAGGCGAATT TTGAGGTCTT GACCGTTTTG TTTTGCTTTG 300
GTTTTGGTTT CGCAGCAAAT CTGTCTGGCT CGGGTGCCCA TGGACTAAAT CCCATCTTCT 360
CCGACACTCC TTCCTTCCCA ATCTCCACCA AATGTGTGCA AGGCAGCGTG TTACCAGTTT 420
TGCTCCCCTG ATGGGAGGTC GTCCTAATCT TTCTCTATCC CTGGGAACTC TGCACCTCCT 480
CGAGGTCCTA TTTATTCCTT AACTTGGGGA ATCTACCCTC ATTTTTTGGT TTGTTTTGTT 540
TCACTCTGTC TAAAACACTC TGCCTTGCAC TCACAGCAAT CCTCCGGCCA CAGCCTCCCA 600
AATGCCAACG GTTACTGGTG TGAGCCACTC CTCCAGGCTG CCTTTCTTTT TGGTTAGGTG 660
AGGACGACGT GAAAAGAGAT CGGGTCCTTC AGACTACCCT CGGCCCGAAA CCTGCAGGGA 720
TGAACGCGGC CGAGCTCTGG GCATCCCAGC CAAACCGCCC CTCAGCTCGC TCTTCCCCGT 780
CCTCCCGGTA GTAGGGCGGG CGACCGCCTT TTCCAGATTC CGCCTTCACG AGAACATTTG 840
TGGAAAAGCC CGGGCTTCTT TTCCGGTCCC CGCTGCGGAG GGCGGAGGCC ATCACGCGGA 900
GGCCGTCAGG CTCTCACCTA GAGCGACTCC GGGTTGAGGA CCACGGAGCC GAGCGAGCGG 960
GGACCGGAAG GAGCCTCGGA TACGCTTCCG GCCGCTCTTG GGAGAGGGAT GAGAATCCTC 1020
AATTCCCTGA AAGAGGGATA GGATCAATTG TGGGAAATCA CGCTTCAAGC TGCACTCTGG 1080
AAGCGAAACA GAATGTAACT AATGAAAATA ACATAGAATT ATATTTCACG GTATAAAATA 1140
AGTACCAAAC TGTTTCCGCC CGGTTTCGAA CCGGGGACCT TTCGCGTGTG AGGCGAACGT 1200
GATAACCACT ACACTACGGA AACTCGCTGG ATGCGGCCCT TCGTATTCCG CAATTCTCTC 1260
AATATGATTT GCTTCTGTTG CTCTCTGTGT ATGGTAATAT GATTAAACCG TGTTTAAATC 1320
TAAGAAGCAG GACTAAACAC AAACCTAGGA ACTCATAATT GGGACCTGAA ACTACATTAT 1380
CATTGTACAA ACGTCTGAAT AGGAAAGACT AAGACACAAT TCTGTAATTT CTTCCAAATT 1440
GCCCTTGTTT CTAAAATTAA TCGCTCTAAT TAGATTTTAA TGGCTTAAGG GGTTACTTCA 1500
AAATCATCCT ACAGCCAATA TGGACTGGTG AGTCATCCTG ACCTAGGGAT AACAGCTCCG 1560
CATATACGCT GGTGACGCCA TCGTATGGAC CGGTGTGGAA TTTGCTCTAC AAAGAAGTGA 1620
TGAACTGCGG CAAGTTGTGG CAAAAGGCTT GCTATGAATT CGAACAGACT GGTTACAGAA 1680
TGAAAAAGTC TCAAAACACA ACGACAGTAA GAGTGATCTT TTTGTTCCAG ACAAACTCAG 1740
ACATGAATGG ATTTTCTTCA TTGAATTTCC AGGAAGTCAA ACAAAAAGAC CTGTACATTC 1800
CGAGCCAGCC AGGAGTCGAA CCTGGAATCT TCTGATCCGT AGTCAGACGC GTTATCCATT 1860
GCGCCACTGG CCCTGTACAC GTAAGCCCTT GGGTGGGGCA ACTACTTACA 1910