EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-02826

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr12:88488850-88489600

Target genes

Number: 9
Name	Ensembl ID

6430527G18Rik	ENSMUSG00000034168
2310044G17Rik	ENSMUSG00000034157
Ngb	ENSMUSG00000021032
Gstz1	ENSMUSG00000021033
Tmed8	ENSMUSG00000034111
Samd15	ENSMUSG00000090812
Vipar	ENSMUSG00000021038
Ahsa1	ENSMUSG00000021037
Ism2	ENSMUSG00000050671

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr12:88488856-88488867	GGGGGCGGGGC	-	6.02
KLF5	MA0599.1	chr12:88488857-88488867	GGGGCGGGGC	-	6.02
SP1	MA0079.4	chr12:88488855-88488870	GGGGGGCGGGGCTGA	-	6.01
SP2	MA0516.2	chr12:88488854-88488871	GGGGGGGCGGGGCTGAG	-	7.32
SP4	MA0685.1	chr12:88488853-88488870	GGGGGGGGCGGGGCTGA	-	6.05

Enhancer Sequence

GTGGGGGGGG GCGGGGCTGA GAGCTCGCTT CTTCGCGTGG CGCCACAACG ACTCCCGGCG 60
TGCACCTCGG CGCCCGCTCA CTCTACACCT GCGCGCTGGC CGCTGAACCT TATGGTGGTG 120
GTAGATTGGG CCGGGAAGGC TAAACTTGGA AGCTTTTGAG GGGCGTCCAA TCGCGCTTTT 180
CCCTGCTTCG GGTAGACAGA CCTCTTCTAG GGCTTTCAAA CATGGTTCCC TACTTTGCAG 240
TTTCGCGGCG CCCTTCGTAT GTCTCTCAGG GGACCTGGTG GTCCAGGCAT GCACCAAAGG 300
CAAGGGGGAA AGATGTGACT CTTTAACGAC GTTAATAATC ACTTGTAGTA TCTGCTCAGG 360
TTTCTAGTTT TGTCGGTTTG GCTCTAAGAA ACGATCTTGC TGTGCAGCCC AACCTGACTT 420
TGAACTTTGA CTCTCCCGCC CCCGCCTTCC AAGTGCTGGG ATTCCAGGCT GTGGCATATG 480
GAGCGTCCAG GGTTTAAGTC GAACTTCTTT AGTCCACCCT AGAGCCATTT GTATTTAAGC 540
CATTGCTGGA ATGGAGCTGC GAGTGTGTTT TATAAGAGAC TTAAAATTGA GTCTCTTAGG 600
AGGGCCGATA TGTAGGAAGG CGGCACATTA GATGCAAAGG ACATTGCATC CGGTTAATAT 660
AGATTTTCCA CATACAGATG TGATTTTTCA GGATTTTAAT CATGTAAGAA ATGGTATAAA 720
AACAGCTAGG GATGTACGCA ACTCTGACGT 750