EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-01997

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr11:86806530-86807090

Target genes

Number: 8
Name	Ensembl ID

Cltc	ENSMUSG00000047126
Dhx40	ENSMUSG00000018425
Ypel2	ENSMUSG00000018427
Gm9378	ENSMUSG00000082507
1200011M11Rik	ENSMUSG00000020495
Prr11	ENSMUSG00000020493
Fam33a	ENSMUSG00000020492
Trim37	ENSMUSG00000018548

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EGR2	MA0472.2	chr11:86807058-86807069	ACGCCCACGCG	+	6.14
USF1	MA0093.2	chr11:86806891-86806902	GGTCACGTGGC	-	6.62
USF2	MA0526.2	chr11:86806888-86806904	ACCGGTCACGTGGCTG	+	6.2

Enhancer Sequence

GGGACTCTCC GCAGAGGCCC CCGCAGCGAG TCTGGCAACA GAGTTCGTGC CCACCCCTTG 60
GCAAGGCCGC AGGGGAGGCG CCGGGAAGCG TCCAGGCAGG AACTCGCTGT GGTTCCCTTG 120
GCTTGGGGCT GCCGAAGCGC TCCGGGGACT TTAGAGGGCG ACGTGCCCCA GACCCAACTA 180
TCTCAATGGA GACATCGACC ATACAGCCGG GTGCCGCCGG GTGCCATCCG TGGGGGGTGG 240
GTCACGCCGA ACAAGGGAGG CGTTGGCGCT CAGGTCTCTG GGTCCCCATA TTTGCCAGGC 300
GGCTCGTCGC CACCCGCCGA GTCCCGAACC CGGAGCGCGC GCCAGTGTTT GTAAACAAAC 360
CGGTCACGTG GCTGCAGCAA CCCGTTCCCC GCCCCTAGCA CCCCGGGAAC CTTCGGGGAG 420
CCCCCTCGGG ACCGCGACAG CACCGCCCCA GCCGAGCCCG GCTGCACGCA GCCCAGGAGC 480
CCGACCGTCC CCAGGGCGCA CAGCCCGAAC TGGAGCGGAA TGCGCCCCAC GCCCACGCGA 540
GCCCAGCTCG AGATCCCTCA 560