EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-01630

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr11:58976250-58976850

Target genes

Number: 12
Name	Ensembl ID

2810021J22Rik	ENSMUSG00000020491
Gm12260	ENSMUSG00000080152
Trim11	ENSMUSG00000020455
Obscn	ENSMUSG00000061462
A230051G13Rik	ENSMUSG00000049287
Gjc2	ENSMUSG00000043448
Guk1	ENSMUSG00000020444
2310033P09Rik	ENSMUSG00000020441
Gm10434	ENSMUSG00000072898
Arf1	ENSMUSG00000048076
Wnt3a	ENSMUSG00000009900
Snap47	ENSMUSG00000009894

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

PHOX2A	MA0713.1	chr11:58976705-58976716	TAATCTAATTA	+	6.32
PROP1	MA0715.1	chr11:58976705-58976716	TAATCTAATTA	+	6.14
Phox2b	MA0681.1	chr11:58976705-58976716	TAATCTAATTA	+	6.32

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_06332

chr11:58975122-58979747

E14.5_Liver

Enhancer Sequence

AAAGGTGAGC AGCTGAAGAC TCAATGCTAT AGACGCAGGC CCTGCCCAGA CTGGCCAGCA 60
AACACTATTT ACAGTCACAG TCAGGTCTGC TGTATAGATA ATGAGACCAT ACAGGCAAAC 120
AGCTGGCACT GCAAAGAGGA ACCAGAAATA AGGGAAAAAC TGGATTCTCA GAACACTGGG 180
ACAATCTGTC ACTGTGGAGA GGCTGTGCAG AGAGTGGCTT TTTGAATAAA GTCCCACGAA 240
CCAGCGAAAT CTTTCTAAGA AGTGAGGAGG GAGGGACAAA GCTGAAGCAC CCATCTTGAA 300
AATAACTCCA GAAGCTTCTG ACTTGACTGG TTGGGGTCCC AGGCACAACG CTCTGTGCAA 360
GTAACTAGCG CAACCTGGAT GCCTTCCATG GGACATCCGC CTCTAGGTGA CCCCTTCCCT 420
AAGTCTAGAT TGTCCTCAGA AAGTCATTTC CAGAATAATC TAATTATGCC TCTTCCCAAG 480
GGTGTCTAGC CAGTATTCCC TAGAAATCTT ATCCTGGACA TCCTTCCTGG GATTCTGGAG 540
GTCTGCTCCC TCAGCACTCT AACGACCCTA CTGCCCCGCC CTGCTGCCCC GCCCAAGCTC 600