EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-01608

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr11:53925750-53927560

Target genes

Number: 8
Name	Ensembl ID

Rad50	ENSMUSG00000020380
Irf1	ENSMUSG00000018899
Slc22a5	ENSMUSG00000018900
Gm12219	ENSMUSG00000080768
Slc22a21	ENSMUSG00000063652
Pdlim4	ENSMUSG00000020388
P4ha2	ENSMUSG00000018906
Fnip1	ENSMUSG00000035992

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr11:53926518-53926538	GGGTTGGGGTTGGCTGGGGG	-	7.39
TFAP2B(var.2)	MA0812.1	chr11:53926417-53926428	AGCCTCAGGCT	+	6.02
USF1	MA0093.2	chr11:53926502-53926513	GCCACGTGACC	+	6.62
USF2	MA0526.2	chr11:53926500-53926516	CAGCCACGTGACCCGC	-	6.91

Enhancer Sequence

CTGCCTCAGT AAATAAATAG AGGGTGATTG ACGAAGACAA GTGACTTCAA ATTTGAGCTT 60
CCATATACAT TCGCATGCAT CCGTATGCAC CCATCCACAA GAAAACACAC GTACGCATAC 120
ACGTTTATAA ACGTTCATAC ACACCAAAAG AATCCGCTTA TGTGTACAAA CATGTTATTA 180
AAAACTGGAG CTATGCATGG CCTAAAGGAT TAAAACTCAC TTGCTTTAAA GGATGAATGA 240
ATTAAAAATA AGCCAAGTGG GCGGAGGCAA GCTGGGTAAC AGAGGCTTCA TCTGAATATG 300
TCCTACATGT GTCTCTTACG CACAACGCAT GTCTGTGTGG AATTGACACA AACGTGCGCT 360
CAGTCCTGCG TTTCCCAGGT TCTGTAGATG CAGCTTAAGT GTGCCTGTGC CGTGACTGTA 420
ATGACGGTAT GGTCATCTCG TAGTGCACCT GGAGTTGTTT CCAATTTTTC AGCCCTCTTT 480
TACATGCATT TTGGGTCTGC CTCTGATTAT TTTTCTAAGC TAAATGACCT AGAAATGGTA 540
TTTACAGGGC AGAGCATAGA TTTGTTTTTC TGGGGTAGTA CCTTCTGCGA GTGAACACGT 600
TCCTGTTACC CAGAGGAGAG GATATCGGTA ATGGAAGGGT GGGCTGGAGG TGGGCCACGG 660
GCTTCCCAGC CTCAGGCTGG GCCGGGCCTC TTCACTTCGC TGAGTGCTGA TTAACTTCAG 720
ACTAGCTGTC TCTCTGGCTG AGACTGGTTA CAGCCACGTG ACCCGCCTGG GTTGGGGTTG 780
GCTGGGGGCT GGGTAGTCTC TGGGGAGGGA TTGGTGAGCT CAGAGCGGCT GGAGCTGTGC 840
CTGTGAGCTC ACAGCCTCCA GAAGCCACTG CCTTTCCCAG ACCCCACCCC CCTTCACCCT 900
CCCTTCCTGG GCTGGGCCTG CTGCACAGAA CAGCTCAGAA CAGGCTGTTC TGCCTGCTTT 960
CTGGAGAGGT AGGCAAGGAA GCCCGCACAG ATGCAGACAA TAGATCTCCA CGCTCCGACG 1020
TCTGATCTTG TCGTCCCCAC TCCCTCCATT GCCATGTGGA AATGCTGTGA TTACCTGGAA 1080
GGTGATTACA CGTCCCGAGA GCAATCGCTT ATTTTCATCT CTGATGTTGG CTGCTTGCCC 1140
CTGAGATAAG GGGGAACCCT GACAGTACCG TGTGGCTATT TCTAGGGGGT TTTCTTTTTT 1200
CCTGTATACT AAAGTCTTCC AAGTTTCTGA CCACATATCT GTGAAGGAGA CGATGTAGCA 1260
GCTCTTTGAC ACCCTGGCTT GGTGTGATGA GAGGGGATAG CAGGGGATGC TGCTACTCTT 1320
GGAAAGGGGC CAGGGATAGA ATGTGTTGGA GCGCCCCTCC CAGTCCCCAG TTCTTAGGCA 1380
AATTCAAAGG CCTGAATCAT TAGTATAGCA AGGCCTGGCT TCTACTTAGA GCCCTAAAAT 1440
AACAGGAGCT GTGTCTCTGG CTTGGGACCA GGGCTTAGGG CCCTGGAAAA AGCCACCTGG 1500
GGCCGCTTCA GGGGTCAAAT CTGTCTAGGC TCTGGGCTGT GGCCTTGGGT ATTAGGAAGC 1560
TCATACCCTG CCTACTGAAC TCTTATGTGC TAAGTTGTGT GCAGGGCTTT TTGGTTCCAA 1620
ATGAACAGCA CAGGGAGGGC TAAGAAAGTT CTGTAGAGGA GCCCCCAGAT AGGACTTCAC 1680
AAGGAAGGGG AGTGAGTTAT TATTGTTGTT TCGACTATTA TTTTGGTGTC GCACCCCGAA 1740
TGTGTGCCAG ACAGGTGTTT CATCACTGAG CCCCCAGCCT GCTGACAGCC TTTGAGGGAA 1800
GGCACAGGGA 1810