EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
MM061-01013 
Organism
Mus musculus 
Tissue/cell
Forelimb_bud_embryo 
Coordinate
chr10:79451480-79453280 
Target genes
Number: 38             
NameEnsembl ID
Gm16517ENSMUSG00000020308
Cdc34ENSMUSG00000020307
BsgENSMUSG00000023175
PolrmtENSMUSG00000020329
Rnf126ENSMUSG00000035890
Fstl3ENSMUSG00000020325
PalmENSMUSG00000035863
Ptbp1ENSMUSG00000006498
Prtn3ENSMUSG00000057729
BC005764ENSMUSG00000035835
Med16ENSMUSG00000013833
Kiss1rENSMUSG00000035773
C030046I01RikENSMUSG00000035781
Arid3aENSMUSG00000019564
Wdr18ENSMUSG00000035754
Grin3bENSMUSG00000035745
ORF61ENSMUSG00000013858
Cnn2ENSMUSG00000004665
Abca7ENSMUSG00000035722
Polr2eENSMUSG00000004667
Gpx4ENSMUSG00000075706
Sbno2ENSMUSG00000035673
Stk11ENSMUSG00000003068
Atp5dENSMUSG00000003072
DosENSMUSG00000035640
MidnENSMUSG00000035621
CirbpENSMUSG00000045193
1600002K03RikENSMUSG00000035595
Efna2ENSMUSG00000003070
Mum1ENSMUSG00000020156
Ndufs7ENSMUSG00000020153
GamtENSMUSG00000020150
Dazap1ENSMUSG00000069565
Rps15ENSMUSG00000063457
Apc2ENSMUSG00000020135
2310011J03RikENSMUSG00000020133
Mbd3ENSMUSG00000035478
Tcf3ENSMUSG00000020167
TF binding sites/motifs
Number: 10             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
IRF1MA0050.2chr10:79452440-79452461ACAGAGAAAGTGAAAGAAAGA-7.44
KLF14MA0740.1chr10:79451893-79451907AAGGGGGCGGGGCC-6.15
KLF16MA0741.1chr10:79451895-79451906GGGGGCGGGGC-6.02
KLF4MA0039.3chr10:79451920-79451931ACAGGGTGTGG-6.14
KLF5MA0599.1chr10:79451690-79451700GCCCCGCCCC+6.02
KLF5MA0599.1chr10:79451896-79451906GGGGCGGGGC-6.02
Myod1MA0499.1chr10:79452981-79452994GGGAACAGCTGCC-6.24
PLAG1MA0163.1chr10:79451821-79451835CCCCCTGAGGCCCC-6.02
SP4MA0685.1chr10:79451892-79451909GAAGGGGGCGGGGCCGG-6.44
ZNF740MA0753.2chr10:79453246-79453259GGGGGGGGGGGGG-6.03
Number of super-enhancer constituents: 6             
IDCoordinateTissue/cell
mSE_03404chr10:79445313-79453117Bone_Marrow
mSE_06348chr10:79445348-79451828E14.5_Liver
mSE_07798chr10:79445937-79453081Intestine
mSE_09202chr10:79447038-79453325Lung
mSE_09619chr10:79446247-79454263MEF
mSE_12142chr10:79446084-79453231Spleen
Enhancer Sequence
ACCGGGTGAG TGGGTTGCGG GGCTTGCCAG CCTCGAACGC ACGACCAATG GGAGCGGGGC 60
TCGCCAGCCT CGAACGCGCG ACCGATGCAT GAGCCGGGAC AGCTGGGCTT TGCTTTACCC 120
TGATATCCGG AGGGTCTGGG GTGCTGTGGG AAGCTGTGGC GTCTGGGAGG CTGGGGACCC 180
ATTTTATCCG CATCCTGAAT GTCACCTCCA GCCCCGCCCC TGGACCTCTC AGTCCCCGGC 240
GCCCCGGGCT TCCTGCACTC TGTGCCCCTT GCAGGATGTA AGAAAGTTAA GGTCCGGGAG 300
AGAGAAAGCG AGCACACGAG CGATCCGGGC GTCTGAGAGT GCCCCCTGAG GCCCCATCTT 360
CATTACCTGT CGAAACTTCC GTTTCATCTA AGCCACTTAA GTTGGGGACA GGGAAGGGGG 420
CGGGGCCGGT GGCCTTCTTA ACAGGGTGTG GTCCGTTCCA GGACTCCCAC ACACACCTGG 480
GAAAGGGCTC ACTGAGAGGA ACCGCAAATG CAGGAGAACA CTGAAGTCAC CAGTTTCGGA 540
GGGACATCTG GGGAGCCATA CAGCAAGGTG TCCTGAGCTG ATGAGGGAGA CACTGATCCC 600
AGACTTAGGG GGCTCAGGCC TGACATCCTG AAACCTTCTA GATAGATCCG CCAACCACAC 660
GCACACACCT GGCACCTGGG AATGCAAGTT TCACAGTCAG CTAAAGCCAA GCAACCTGCC 720
TAGGCACGCT GAAGCTACCA GTCGGACCCA CCTCCGACTG GCACCTGCCA GGTCCCTACA 780
AGTGACACGA GAGGCATACC TACCTCATGC CACCCATGTG CTATCCTCAG CCTGCTAGAG 840
ACAAGTTGCT ATTTCACTTC CCACCCTGGG CTCAGAGAGG TTGCTCTAGC TCCCCAGAGA 900
CACACAGCAT TCTGACGACC CTGCCCAATT CTTCCTGGAC AGACTGGACA TCTCCCTGGA 960
ACAGAGAAAG TGAAAGAAAG AGTCAGGACA GCCCTAAGGA TAGAGTTTTA GGAGCTGGGT 1020
GGGGCCAGGG ACAGGTCAGC ACTTGCTCAG GGGATGAGCT CTCAGATCCC CTCCAACTGT 1080
GGAGCTGGGA AGTGGACCCC CCCCCCCCAG TAGCCTGCAG GGGTCACAGA AGGGTTGCAT 1140
CGTCCACTGG GAGGGGGGAT CCGGAGACTT TTCTGCCTGA CCTATGTGCC TCAGTTTACC 1200
CCCCTAGCTG GCCCATATCC CGTGGGACTT TGTTCGGTCC AGTTGAGGAG CCTGGCCACT 1260
GGGGAACAGC TGGTCTTGAT TTAGACCCGG GAGGCCACCG CATTCCTGGT AGTTTGTGGC 1320
CTGCGGGCAG GAATGCGCTG AAGGGCAGTG GGGAGGGAGG TGGCCGCAGC GGGCGGGACT 1380
GAGCCCCTGC CCTCCTCCTT GGTCCTCAGA GTGGCTAGGG ACGTGGCACA GCTGGACCAG 1440
GCATGCTTGG CGTCCCTGGC CGACCCCTGT TCCCCTCTGG GCTGTCCTTG CTTTTTCCTG 1500
TGGGAACAGC TGCCCCGACT GCCCCTGCAC CCAGCTAATC CCACTTCGAA GGATTTTAAA 1560
AGACAGGAAG GGGAGAGGGA GCGCCTGACA GCGAACTCTT ACACAAACCA GTCCATATAG 1620
GAAACTGCCG GGCATGGTGG CGCACGCCTT TAATCCCAGC ACTCGGGAGG CAGAGGCAGG 1680
CAGTTTTCTG AGTCGTAGGC TAGTGGTCTA CAAAGTGAGC TCCAGGACAG CCAGGGCTAC 1740
ACAGAGAAAC CCTGTCTCGA AAAACCGGGG GGGGGGGGGC CGGGGGACTG GCGGATGGAG 1800