EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
MM061-01012 
Organism
Mus musculus 
Tissue/cell
Forelimb_bud_embryo 
Coordinate
chr10:79446030-79446650 
Target genes
Number: 39             
NameEnsembl ID
Gm16517ENSMUSG00000020308
Cdc34ENSMUSG00000020307
BsgENSMUSG00000023175
PolrmtENSMUSG00000020329
Rnf126ENSMUSG00000035890
Fstl3ENSMUSG00000020325
PalmENSMUSG00000035863
Ptbp1ENSMUSG00000006498
Prtn3ENSMUSG00000057729
BC005764ENSMUSG00000035835
Med16ENSMUSG00000013833
Kiss1rENSMUSG00000035773
C030046I01RikENSMUSG00000035781
Arid3aENSMUSG00000019564
Wdr18ENSMUSG00000035754
Grin3bENSMUSG00000035745
ORF61ENSMUSG00000013858
Cnn2ENSMUSG00000004665
Abca7ENSMUSG00000035722
Polr2eENSMUSG00000004667
Gpx4ENSMUSG00000075706
Sbno2ENSMUSG00000035673
Stk11ENSMUSG00000003068
Atp5dENSMUSG00000003072
DosENSMUSG00000035640
MidnENSMUSG00000035621
CirbpENSMUSG00000045193
1600002K03RikENSMUSG00000035595
Efna2ENSMUSG00000003070
Mum1ENSMUSG00000020156
Ndufs7ENSMUSG00000020153
GamtENSMUSG00000020150
Dazap1ENSMUSG00000069565
Rps15ENSMUSG00000063457
Apc2ENSMUSG00000020135
2310011J03RikENSMUSG00000020133
Reep6ENSMUSG00000035504
Mbd3ENSMUSG00000035478
Tcf3ENSMUSG00000020167
TF binding sites/motifs
Number: 10             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
NR2C2MA0504.1chr10:79446617-79446632TGGGGTCAGGGGTCA+6.67
NR2C2MA0504.1chr10:79446631-79446646AGAGGTCAGGGGTCA+7.19
NR2C2MA0504.1chr10:79446624-79446639AGGGGTCAGAGGTCA+9.03
Nr2f6MA0677.1chr10:79446625-79446639GGGGTCAGAGGTCA+7.03
RXRBMA0855.1chr10:79446618-79446632GGGGTCAGGGGTCA+6.04
RXRBMA0855.1chr10:79446625-79446639GGGGTCAGAGGTCA+7.06
RXRGMA0856.1chr10:79446618-79446632GGGGTCAGGGGTCA+6.1
RXRGMA0856.1chr10:79446632-79446646GAGGTCAGGGGTCA+6
RXRGMA0856.1chr10:79446625-79446639GGGGTCAGAGGTCA+7.01
RxraMA0512.2chr10:79446625-79446639GGGGTCAGAGGTCA+6.98
Number of super-enhancer constituents: 5             
IDCoordinateTissue/cell
mSE_03404chr10:79445313-79453117Bone_Marrow
mSE_06348chr10:79445348-79451828E14.5_Liver
mSE_07798chr10:79445937-79453081Intestine
mSE_09619chr10:79446247-79454263MEF
mSE_12142chr10:79446084-79453231Spleen
Enhancer Sequence
GCTGTAGAGG TCCCTGGCCA ATCTGGCTGT GACTCTGTGG CTGACCCTAG TGAGATGACC 60
TCACCCAAAG CCACAGAAAA CCTGGCAAGA GTCTGAAAAC AGTGAAGTAA CAGAAAATTT 120
GAGCAGTGAC ACTGGGGGGT AGGGGGCTGT CCCCAGGGGG TTGGTTCAGG GTGTGCTGGA 180
ATGGGACTGA CTAGTAGAGA CTGGACTGAG AGAATCAGGG TAGAATAGAA ATGACAGGCG 240
GGACAGGGCC TCCAGCACAG GAGGTGGTCT ACAGTGGAAA GTCAGGAATG GAATGGAAAT 300
GACCATATTG TTCTCAGTGG AGGTGCAGGA CAGGATGGGA GTGACAGGTG GGAAGGTGGA 360
CCTCGAGTCC AAAATCCTAC TCCAAGAGGA CACTGGGCTC TGGTCTTGAG TGGAAAAATT 420
TGGGGCCTAG GCTCCCAAGT GGCAGACTGA GGCCAAAGGG CAGGAGGCGG GGCCTGAGAG 480
CTGAGGAAGT GAGGACCAGA GATAGCATCT GTAAGAGTGG TATCAGGGTA TCCAGGCGTC 540
AGGAGCCAAG TGGTAAAGTT GCCGGGGGTG GGCGAGCGGA TGACAGCTGG GGTCAGGGGT 600
CAGAGGTCAG GGGTCAGAGG 620