EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-00734

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr10:6403530-6405300

Target genes

Number: 4
Name	Ensembl ID

Akap12	ENSMUSG00000038587
Gm16074	ENSMUSG00000082247
Mthfd1l	ENSMUSG00000040675
Gm16148	ENSMUSG00000082605

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Myod1	MA0499.1	chr10:6404550-6404563	ACCAGCTGTCCCT	-	6.12
SP2	MA0516.2	chr10:6404699-6404716	CGAAGCCCCTCCCCCTC	-	6.26
ZNF263	MA0528.1	chr10:6404706-6404727	CCTCCCCCTCCCCCTTGCTTC	+	6.25

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_10585

chr10:6403034-6406954

Embryonic_stem_cells

Enhancer Sequence

TCCCAGAATT TCTTCTGATT TTCCCCATCA GTACCACTCT ATGACCCTGA TGTCACTTCC 60
TGTTCTACTT CTCTCCTCCT GGTCCCATCA CAGACATCCC ACCATCCTCA CAGATGGCCA 120
TTCACACCCA ACCCTTTTAG ACTTTTGCTA CGTCATCTCT AATAACTGTT TCCTCTACTC 180
CACAGCAGCA TGGTAAAGCC ATCCCAGAAC ATGCACACAC CAGCGTTGCC CTGCTTCTCA 240
GGTAGGGTAC CAGGGACCAT CCTCAACTTC AGATTTCAGG TTTCCCACTG AACCAGCTGA 300
CTTCTGCAAG TCTCTTTCCC CTGTTCAGCC TGGAATCATA GTCACTGCAG CTACAGGCTC 360
ATGAGTGTGC AATGTTCTCT GTTCCCCAGC TCCACCTGTC CCCTCCCTGC AGAGGAACTC 420
CTGTATGCCA TGCTCCCTTA GGGCAGTTGT TAAGTGGTTT GTTATGACGC CATCAAACTG 480
ATTCACACAG CAGTCCCACA GCCCCAGTCA GGTCTTTGGC GTCTTCCAGA TGGGACCTGA 540
GTCACCTCCA GTGACAGGAT CGTCTTCCTT TGCATCGAAT CTGACTCTCT CCATTTTCAA 600
GGACAAACCC TCTTCCTGTG TCGTCACTCA CAGTAGTGTC TCTGATCCTT TATGATTTCC 660
TAATTCTCCT CAGTTCCCCG CCAGACTCTT TCCAAGGCTC CTCTCTACCA TCCCTGTGCT 720
TACGGGCCCC ATTCCTTCCA CCTCCCTTGA CAAACTGCTC TTCTGCATCC TGTTGCATCC 780
TGCCTCTTAG TCTCCCCAGA CAACTCAGAA ACCTATATTG TGTTTTCCAC CCAGATAGTG 840
AGCTTTGCTT TGATGAGTTT TCTCTAAACT GCATCTTTTT GAACTTTGGG GGTGGGGCAG 900
TCGGTACCAG TCTGTTCTCT AATTTCTTTC AACCCATTGC AAAAATCCCA GTTGTCGAAC 960
CCACACTCTG CATCTGTTTT GCCCTCTCAA GGTGGAGGTT CTTCTGTCCC CTCCTTCCTC 1020
ACCAGCTGTC CCTTCCTGCT CTTTACTGGG TTTCTGCTGT TCTCTCTGGT CTTCCAGGTG 1080
CCCCTCCCCC AGCAGGTGAC TTGCTGAGAT TCCTAAGACT CCTCTTTTTT TCCCTAATAA 1140
TTTTTTTAAA ATTCACTTTA CATCTCGATC GAAGCCCCTC CCCCTCCCCC TTGCTTCCCC 1200
ACATTACAAG CCCCTTCCCC CATTACCCCT CCCAGTCTCC TCAGAGCAAG GGGCAACCTT 1260
GTTTCCTTTA TACATTCTTG TGGGCCTTAG CCCTGTCAAG CCTTAGGGCC TCAGTCACTG 1320
CCTCTCCTAA TCCTGGGCTG CCAGAACCTG AATTTCCACC TCCATTCACC GGCCAGATGC 1380
TCCTCCACTC CCATCTAACC AGTTAGGCCA CCTCTGTGAG CCAGTCTGGC TAACTCCCAA 1440
CCCAGAGGTC TTCCCGCAAC TCAAGCACAA TGTCAGAGGT GACTTCTGTT CCCTTTGCCT 1500
GGGTGACCTG CTTTGCATCT GCGCCTTGTG TTCTGCTCCC TAGACTACTT CCCCAGCCGC 1560
ATTCCTGCCC CATTTCCTGG TCCTCCTGTC CCAACACCAG CTGTGTTTGG CAAACAGGGT 1620
GTCACTTGTG TTTTTGTGAC TTTGTTGTCT CAGCCTAGTT CCGCCCTTCC CCCTCCCCAA 1680
CTTCAGAAGG ACATTCCTCA CCCTTCAAGA AAGCAGGAGG TATTTTCCTT CCTGCCCTTA 1740
CTGGCTAGAC CTGAACACTT TGTCCTTTTG 1770