EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-00469

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr1:140733140-140734910

Target genes

Number: 4
Name	Ensembl ID

Lhx9	ENSMUSG00000019230
2310009B15Rik	ENSMUSG00000079283
Dennd1b	ENSMUSG00000056268
Gm16305	ENSMUSG00000085361

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ESR1	MA0112.3	chr1:140734259-140734276	GAGGTCTAGATGACCTG	+	6.22
TFAP2B	MA0811.1	chr1:140734573-140734585	TGCCCTGGGGCT	-	6.11
TFAP2C	MA0524.2	chr1:140734573-140734585	TGCCCTGGGGCT	-	6.11
ZBTB18	MA0698.1	chr1:140733775-140733788	AGTCCAGATGTTC	+	6.11
ZNF263	MA0528.1	chr1:140733224-140733245	CTCCCTCCCTCCTCTTCCCCT	-	6.13

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_05968

chr1:140733669-140739744

E14.5_Limb

Enhancer Sequence

GTTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC 60
TCTCCTAGTT GTTTAAAACC CTGTCTCCCT CCCTCCTCTT CCCCTCCGAC TTTCTGTTCC 120
TCCTTCTCTC CTCTCCTTTC TCAGTAGCAC AGTCAGGTCT TAGTAAGTGG CTAGAAATTT 180
AAATGTCATC TTCTATCAAT AAAGAACAAT TAGTGTCCTG CCTGTCTTGC CTTGAATGTC 240
GTGCATCAAA GAATATGGAG TGTGCCCTGG GCAATTGGAC CCTAGGCAAA GCTCTCTGCC 300
TCAGCTTAGC AGGGGTCCCC CAGGCCAGGG TACAACCAGG CACAGCCACT AAGCCCTTGG 360
CCAACCCCTG GGCTGAGCCC ACTGCCCTGA TAGGAACCTA CCCTTAGCCT CTGTGTTGGC 420
CCCTTTCCCT TGGTCCAGCA GCTGCCCAGA TGTGAACTCA CTAGAGACAG ATGCAACCTC 480
CTTGGGCTAC ATGTTTCTTT TCTCTGAGAA GCCCTCTCTT TGTGCCATCC CAAAATGAAT 540
TCTTTTAAAG TGGGAAGAGA ATCCCACACA GCCTAGCTTA GGGACCACAC CTGCTCAGGA 600
TCATCTGAGA ACTAGGAAAT CCGAGTGGGA ATCTCAGTCC AGATGTTCAC AATGTCTGGG 660
ACCTCAGGCG GATCACTTAA ATAGGATATT GTTCTACTAT CTTCCAGCTA CAAGTCACAT 720
GCCACACCAG ACACTGAAAA CTGGAAGGTG ATACTCACGG CCAGTTTGTC TCTTTTAGTA 780
GCCCAAAGGT CCCTATGTGC TGAGTTCCCA AATGGGTTGG GGCCAGGGCA TGGGAAATCA 840
GAGCAGACAA GTTCCTTGGG CTTCCCCAAA CCAATCCTGG GTCCCCTTTC CTTGCCCTCT 900
GCGCTTGAAT AAGAGCTCAG GTCTTCAGGG CAAGTAGCCT CACTTGTGAG TGAGGCAGAT 960
TGATAAATGA TAGACGTATC CTCCAAAGCA AGGAAGTCTT TAGGGACTGT TGCCTGTACT 1020
CTGATTTGAA TTGGGAGACG GCTGGCAAAC TGCTGGCAAA CAGGCAGCCT GAGGTAACAC 1080
TAAGCCACCC CAGTGGACTG GAGATACTTC TGGTTATCTG AGGTCTAGAT GACCTGATGA 1140
TCTCTCAGGC AGGGAGTGAA GAGGTTAGAT GAATACCCTG AGCCTCCAGA GGCACAGCTG 1200
TCTCAGCTGT GCAGAGTGAG TCCCACCCTA TAGTTGCTCA TTGCCGAGAT CAGAGATGCC 1260
GATTTTTTTC AATACCCTCG CCAACTGTGT TGCTGATTAA CTTTGGGCTG GTGACCACAG 1320
CCTCTGCCCC CTCTAGACAG AGTGGAGCTG GGCTCTGAAG TCTTTTCTTT TCCCCCATTA 1380
ACTATTTAGG AAAACCTCCT CCAGGATCTA TAATTTGGCT CCAACAAAGG AATTGCCCTG 1440
GGGCTGTTTT GCTCCAACTG AGAGCCAGAA ACTAATGGGC TCATTAACTA ATGGGCAACA 1500
AGGATTTGGC TTTGCCTGTT TGGGGGAAGT CACTTCGGCC TCACGGTTAT AAATTTTTTT 1560
CCCCCACAAG CTCAATAACC AATAACCCAT CCTCTCTCCC CTTCCGTCTC CTTTACTTCT 1620
TTCTCTTCCT CAGACTGAGA GAGGTGTGGT GAGAACAGGG TCCTGTTAGG CAAAGCACTG 1680
TCTTGGTGAC TTGGTGTTGG AACAGCACCA AGTCCTGCTA AATCCTCCTC CAGCAGTGTG 1740
AGATCTGAGC TGTCGGAGTG GGTAAAGGTA 1770